Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1135
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    49   3e-08
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    48   7e-08
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                48   7e-08
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    41   8e-06
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    41   8e-06
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    37   1e-04
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    33   0.002
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   5.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.5  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   7.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   7.2  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   7.2  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 49.2 bits (112), Expect = 3e-08
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
 Frame = -1

Query: 433 QVADAVEYCHQHHVIHRDIKPENILVAFSGD---LKLADFGWSVHAPS*ANKLF 281
           Q+ ++V +CH + V+HRD+KPEN+L+A       +KLADFG ++     A   F
Sbjct: 17  QILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWF 70


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 48.0 bits (109), Expect = 7e-08
 Identities = 18/44 (40%), Positives = 31/44 (70%)
 Frame = -1

Query: 445 YFNLQVADAVEYCHQHHVIHRDIKPENILVAFSGDLKLADFGWS 314
           ++   V +A +Y H  ++I+RD+KPEN+L+   G +KL DFG++
Sbjct: 470 FYTACVVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFA 513


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 48.0 bits (109), Expect = 7e-08
 Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
 Frame = -1

Query: 421 AVEYCHQHHVIHRDIKPENILVAFSGDLKLADFGWSV--HAPS*ANKLF*T 275
           A+++CH   ++H D+KP+NIL++ +G  KL DFG SV   AP+  +K + T
Sbjct: 167 ALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNEIDKFYGT 217


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 41.1 bits (92), Expect = 8e-06
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -1

Query: 436 LQVADAVEYCHQHHVIHRDIKPENILVAFSGDLKLADFGWSV 311
           L V + + Y H   ++HRD+K +N+L+      KL DFG+ +
Sbjct: 704 LDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCI 745


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 41.1 bits (92), Expect = 8e-06
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -1

Query: 436 LQVADAVEYCHQHHVIHRDIKPENILVAFSGDLKLADFGWSV 311
           L V + + Y H   ++HRD+K +N+L+      KL DFG+ +
Sbjct: 742 LDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCI 783


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 13/42 (30%), Positives = 28/42 (66%)
 Frame = -1

Query: 445 YFNLQVADAVEYCHQHHVIHRDIKPENILVAFSGDLKLADFG 320
           ++  ++A  + + H   +++RD+K +N+L+   G +K+ADFG
Sbjct: 89  FYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFG 130


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 33.5 bits (73), Expect = 0.002
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -1

Query: 430 VADAVEYCHQHHVIHRDIKPENILVAFSGDLKLADFGWS 314
           +A  ++Y  + + +HRD+   N+LV  +   K+ADFG S
Sbjct: 744 IASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLS 782


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 605 CGFTFQQTLHFKVVVSQ 555
           CG+  ++ L +K+++SQ
Sbjct: 472 CGYEIKKLLRYKLLISQ 488


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +3

Query: 75  AVTETV*MPSYFVIKSVFQNGWHEFFTVAECSMLLNETIRS 197
           A+T+T   P++  IK   + G  +    A     L +T+R+
Sbjct: 500 AITQTGTGPAFLTIKEWIERGTTKSMEAANIMSKLPKTVRT 540



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 364  ILVAFSGDLKLADFGWS 314
            I+ A   D+KL+DFG+S
Sbjct: 1403 IMDAHFKDVKLSDFGFS 1419


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 362 NIFWFYVTMYYMMLV 406
           N+FW +V  Y+  L+
Sbjct: 36  NLFWLFVGTYFPSLI 50


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 199 CDRMVSFSSIEHSATVKNSC 140
           CD  VSF  +  +A++ N C
Sbjct: 114 CDLWVSFDVLSCTASILNLC 133


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 224 SIAPKFQKLFNNVALGKSLEQFI 292
           +I+ K+Q++FN   L    + FI
Sbjct: 114 NISEKYQEIFNGYFLNSESKDFI 136


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,124
Number of Sequences: 438
Number of extensions: 3230
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)