Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1132
         (483 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6F4F Cluster: PREDICTED: similar to CG9799-PA;...    62   8e-09
UniRef50_Q7Q9X1 Cluster: ENSANGP00000012199; n=1; Anopheles gamb...    53   3e-06
UniRef50_Q9VFV8 Cluster: CG9799-PA; n=5; Endopterygota|Rep: CG97...    51   2e-05
UniRef50_Q4S348 Cluster: Chromosome 4 SCAF14752, whole genome sh...    47   3e-04
UniRef50_UPI000065FC04 Cluster: WD repeat protein 36 (T-cell act...    45   8e-04
UniRef50_Q6DRC9 Cluster: TA-WDRP-like; n=17; cellular organisms|...    33   2.6  
UniRef50_Q8NI36 Cluster: WD repeat-containing protein 36; n=21; ...    33   4.5  
UniRef50_Q3WCK7 Cluster: Alpha-L-arabinofuranosidase; n=1; Frank...    32   7.8  

>UniRef50_UPI0000DB6F4F Cluster: PREDICTED: similar to CG9799-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG9799-PA
           - Apis mellifera
          Length = 842

 Score = 61.7 bits (143), Expect = 8e-09
 Identities = 25/34 (73%), Positives = 26/34 (76%)
 Frame = +2

Query: 380 GEHPGPITCRVGDKYHVYTASENNIYAWRRGCEL 481
           G HPG ITC  GD YHVYTA EN IYAWRRG E+
Sbjct: 58  GVHPGEITCLAGDVYHVYTACENEIYAWRRGSEI 91



 Score = 57.6 bits (133), Expect = 1e-07
 Identities = 25/50 (50%), Positives = 31/50 (62%)
 Frame = +3

Query: 228 FLRQQGFRLVSTHVPCAARYIQRRGETILCTSVGKWFHTYGCNKFRLLSV 377
           FLR +    VS H+P   RYI+RR E ++ T  G  FHTY C+ F LLSV
Sbjct: 7   FLRNRALGYVSNHIPLITRYIKRRKENLIVTCTGNAFHTYSCSHFTLLSV 56


>UniRef50_Q7Q9X1 Cluster: ENSANGP00000012199; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000012199 - Anopheles gambiae
           str. PEST
          Length = 924

 Score = 53.2 bits (122), Expect = 3e-06
 Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = +3

Query: 222 SH-FLRQQGFRLVSTHVPCAARYIQRRGETILCTSVGKWFHTYGCNKFRLL 371
           SH F   +    VS H+P   RYI +R E ++ T VG+ FH YGCN FRL+
Sbjct: 4   SHLFQPNRALGYVSNHIPPNVRYIDQRRENVVITCVGRSFHVYGCNSFRLI 54



 Score = 32.3 bits (70), Expect = 5.9
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 386 HPGPITCRVGDKYHVYTASENNIYAWRRGCEL 481
           HP  IT    D +  Y A+ N IY WR   EL
Sbjct: 60  HPANITAIAADGFLTYVAAGNLIYGWRSSVEL 91


>UniRef50_Q9VFV8 Cluster: CG9799-PA; n=5; Endopterygota|Rep:
           CG9799-PA - Drosophila melanogaster (Fruit fly)
          Length = 922

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 23/50 (46%), Positives = 29/50 (58%)
 Frame = +3

Query: 228 FLRQQGFRLVSTHVPCAARYIQRRGETILCTSVGKWFHTYGCNKFRLLSV 377
           F R +    VS  VP   RY+QRR +T+L T +G+ F  Y  N FRLL V
Sbjct: 26  FRRNRALGYVSNQVPAVTRYVQRRRDTLLITCIGRSFQVYTANHFRLLHV 75



 Score = 39.9 bits (89), Expect = 0.029
 Identities = 17/31 (54%), Positives = 18/31 (58%)
 Frame = +2

Query: 380 GEHPGPITCRVGDKYHVYTASENNIYAWRRG 472
           G HP  IT    D+ H YTAS   IYAWR G
Sbjct: 77  GLHPDEITALATDRLHTYTASNKCIYAWRAG 107


>UniRef50_Q4S348 Cluster: Chromosome 4 SCAF14752, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 4 SCAF14752, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 1013

 Score = 46.8 bits (106), Expect = 3e-04
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
 Frame = +3

Query: 243 GFR---LVSTHVPCAARYIQRRGETILCTSVGKWFHTYGCNKFRLLSVVVSI 389
           GFR   L S HVP A RY Q+  E  L T+VGK FHTY  N+  +++V  S+
Sbjct: 17  GFRVLGLYSNHVPHAVRYHQKHREFYLVTAVGKSFHTYNVNRLGIVAVSNSL 68


>UniRef50_UPI000065FC04 Cluster: WD repeat protein 36 (T-cell
           activation WD repeat-containing protein) (TA-WDRP).;
           n=1; Takifugu rubripes|Rep: WD repeat protein 36 (T-cell
           activation WD repeat-containing protein) (TA-WDRP). -
           Takifugu rubripes
          Length = 997

 Score = 45.2 bits (102), Expect = 8e-04
 Identities = 21/48 (43%), Positives = 30/48 (62%)
 Frame = +3

Query: 252 LVSTHVPCAARYIQRRGETILCTSVGKWFHTYGCNKFRLLSVVVSIQD 395
           L S HVP A R+ Q+  E  L T+VGK FHTY  N+  +++V  S+ +
Sbjct: 23  LYSNHVPHAVRFHQKHREFYLVTAVGKCFHTYNVNRLGIVAVSNSLPE 70


>UniRef50_Q6DRC9 Cluster: TA-WDRP-like; n=17; cellular
           organisms|Rep: TA-WDRP-like - Danio rerio (Zebrafish)
           (Brachydanio rerio)
          Length = 896

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +3

Query: 243 GFR---LVSTHVPCAARYIQRRGETILCTSVGKWFHTYGCNKFRLLSV 377
           GFR   L S H+    R+ ++  E  + T+VG+ FHTY   K  +++V
Sbjct: 16  GFRALGLYSNHLAHVVRFHKKHREFYVVTAVGQCFHTYNVKKLGIVAV 63


>UniRef50_Q8NI36 Cluster: WD repeat-containing protein 36; n=21;
           Eutheria|Rep: WD repeat-containing protein 36 - Homo
           sapiens (Human)
          Length = 951

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +3

Query: 243 GFR---LVSTHVPCAARYIQRRGETILCTSVGKWFHTYGCNKFRLLSVVVSI 389
           GFR   L S  +P   R+   +    + T VGK FHTY   K  L++V  S+
Sbjct: 72  GFRALGLFSNDIPHVVRFSALKRRFYVTTCVGKSFHTYDVQKLSLVAVSNSV 123


>UniRef50_Q3WCK7 Cluster: Alpha-L-arabinofuranosidase; n=1; Frankia
           sp. EAN1pec|Rep: Alpha-L-arabinofuranosidase - Frankia
           sp. EAN1pec
          Length = 492

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 380 GEHPGPITCRVGDKYHVYTAS 442
           G HP P  CRVGD Y++ T+S
Sbjct: 9   GFHPDPSICRVGDDYYLVTSS 29


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 431,159,224
Number of Sequences: 1657284
Number of extensions: 7867635
Number of successful extensions: 16307
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16305
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)