Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1132
         (483 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          24   3.1  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   4.2  
Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase pr...    23   5.5  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    23   7.3  
AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    23   7.3  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   7.3  

>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = -2

Query: 401 LW-VLDAHHNAKQAEFVTAISVKPLSYARTKYCFTTSL 291
           LW V D H N    +F+TA  V P +     +   T L
Sbjct: 130 LWLVTDYHENGSLFDFLTARCVDPDTMLEMAFSIATGL 167


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 416 LQPYMLWVLDAHHNAKQAEFVTAISV 339
           L+ Y+LW    H + +QAE  + + +
Sbjct: 5   LKKYVLWFAQEHVDFRQAEIASLLRI 30


>Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase
           protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 380 GEHPGPITCRVGDKYHVYTASENNIYAWRRGC 475
           G+  GP+  R GDK+ +       I +W  GC
Sbjct: 190 GDSGGPLLVRNGDKHEIV-----GIVSWGVGC 216


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 320 RTKYCFTTSLDISSSTRHMC 261
           R  +C+T  + +  ST H C
Sbjct: 111 RISFCYTERMGLDGSTGHGC 130


>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 434 CRHDICLQPYMLWVLDAHHNAKQAEFVTAISVKP 333
           C H +    Y +     H+NAK   F  A+  KP
Sbjct: 89  CEHTLEGSTYSMEAHAVHYNAKYGSFAEAVD-KP 121


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 271 GTCVLTNLKPCCLRKC 224
           G CV    + CC RKC
Sbjct: 31  GVCVWMLCEVCCSRKC 46


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,356
Number of Sequences: 2352
Number of extensions: 8863
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)