Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1132
         (483 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016079-1|AAV36964.1|  922|Drosophila melanogaster LD47749p pro...    51   1e-06
AY052114-1|AAK93538.1|  922|Drosophila melanogaster SD06427p pro...    51   1e-06
AE014297-1680|AAF54941.1|  922|Drosophila melanogaster CG9799-PA...    51   1e-06
AY119658-1|AAM50312.1| 1006|Drosophila melanogaster SD04414p pro...    28   5.8  
AF211192-1|AAF32278.1|  983|Drosophila melanogaster SULF1 protein.     28   5.8  
AE014297-2184|AAF55296.1| 1114|Drosophila melanogaster CG6725-PA...    28   5.8  

>BT016079-1|AAV36964.1|  922|Drosophila melanogaster LD47749p
           protein.
          Length = 922

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 23/50 (46%), Positives = 29/50 (58%)
 Frame = +3

Query: 228 FLRQQGFRLVSTHVPCAARYIQRRGETILCTSVGKWFHTYGCNKFRLLSV 377
           F R +    VS  VP   RY+QRR +T+L T +G+ F  Y  N FRLL V
Sbjct: 26  FRRNRALGYVSNQVPAVTRYVQRRRDTLLITCIGRSFQVYTANHFRLLHV 75



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 17/31 (54%), Positives = 18/31 (58%)
 Frame = +2

Query: 380 GEHPGPITCRVGDKYHVYTASENNIYAWRRG 472
           G HP  IT    D+ H YTAS   IYAWR G
Sbjct: 77  GLHPDEITALATDRLHTYTASNKCIYAWRAG 107


>AY052114-1|AAK93538.1|  922|Drosophila melanogaster SD06427p
           protein.
          Length = 922

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 23/50 (46%), Positives = 29/50 (58%)
 Frame = +3

Query: 228 FLRQQGFRLVSTHVPCAARYIQRRGETILCTSVGKWFHTYGCNKFRLLSV 377
           F R +    VS  VP   RY+QRR +T+L T +G+ F  Y  N FRLL V
Sbjct: 26  FRRNRALGYVSNQVPAVTRYVQRRRDTLLITCIGRSFQVYTANHFRLLHV 75



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 17/31 (54%), Positives = 18/31 (58%)
 Frame = +2

Query: 380 GEHPGPITCRVGDKYHVYTASENNIYAWRRG 472
           G HP  IT    D+ H YTAS   IYAWR G
Sbjct: 77  GLHPDEITALATDRLHTYTASNKCIYAWRAG 107


>AE014297-1680|AAF54941.1|  922|Drosophila melanogaster CG9799-PA
           protein.
          Length = 922

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 23/50 (46%), Positives = 29/50 (58%)
 Frame = +3

Query: 228 FLRQQGFRLVSTHVPCAARYIQRRGETILCTSVGKWFHTYGCNKFRLLSV 377
           F R +    VS  VP   RY+QRR +T+L T +G+ F  Y  N FRLL V
Sbjct: 26  FRRNRALGYVSNQVPAVTRYVQRRRDTLLITCIGRSFQVYTANHFRLLHV 75



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 17/31 (54%), Positives = 18/31 (58%)
 Frame = +2

Query: 380 GEHPGPITCRVGDKYHVYTASENNIYAWRRG 472
           G HP  IT    D+ H YTAS   IYAWR G
Sbjct: 77  GLHPDEITALATDRLHTYTASNKCIYAWRAG 107


>AY119658-1|AAM50312.1| 1006|Drosophila melanogaster SD04414p
           protein.
          Length = 1006

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 461 RHKCYFHLQCRHDICLQP 408
           +HKC FHLQ  H +   P
Sbjct: 472 KHKCKFHLQLEHQLAAMP 489


>AF211192-1|AAF32278.1|  983|Drosophila melanogaster SULF1 protein.
          Length = 983

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 461 RHKCYFHLQCRHDICLQP 408
           +HKC FHLQ  H +   P
Sbjct: 476 KHKCKFHLQLEHQLAAMP 493


>AE014297-2184|AAF55296.1| 1114|Drosophila melanogaster CG6725-PA
           protein.
          Length = 1114

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 461 RHKCYFHLQCRHDICLQP 408
           +HKC FHLQ  H +   P
Sbjct: 580 KHKCKFHLQLEHQLAAMP 597


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,615,276
Number of Sequences: 53049
Number of extensions: 378179
Number of successful extensions: 1064
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)