Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1131
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   6.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   6.1  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 77  LHFLPCLFYNYFSAVVY 27
           L FLPC++Y Y + +++
Sbjct: 206 LLFLPCIYYFYSAFIIF 222


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 223 NRILGVAFYWGFGALERVPAVLILF 149
           N +  + FYW FG L      L LF
Sbjct: 315 NNLERIYFYWSFGFLIVRTVCLCLF 339


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 223 NRILGVAFYWGFGALERVPAVLILF 149
           N +  + FYW FG L      L LF
Sbjct: 315 NNLERIYFYWSFGFLIVRTVCLCLF 339


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +2

Query: 452 RTTVTELDLFPSLSHW 499
           + T   +D+FP+++ W
Sbjct: 172 KNTTVSIDVFPAVARW 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,446
Number of Sequences: 336
Number of extensions: 3866
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)