Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1131
(761 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26622| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_30655| Best HMM Match : DUF1279 (HMM E-Value=0.5) 36 0.027
SB_24063| Best HMM Match : OAR (HMM E-Value=2.8) 36 0.027
SB_56950| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.047
SB_50121| Best HMM Match : DoxX (HMM E-Value=1.6) 35 0.063
SB_59013| Best HMM Match : DoxX (HMM E-Value=1.6) 35 0.063
SB_24460| Best HMM Match : DUF1393 (HMM E-Value=2.9) 35 0.083
SB_4035| Best HMM Match : DUF1279 (HMM E-Value=0.15) 35 0.083
SB_1244| Best HMM Match : CbiZ (HMM E-Value=2.6) 34 0.11
SB_19211| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_15001| Best HMM Match : Calx-beta (HMM E-Value=0.023) 34 0.11
SB_11645| Best HMM Match : Herpes_US9 (HMM E-Value=0.39) 34 0.11
SB_27074| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_20528| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_3749| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_30425| Best HMM Match : OAR (HMM E-Value=2.8) 34 0.14
SB_57163| Best HMM Match : 3HCDH_N (HMM E-Value=2.4) 33 0.19
SB_13333| Best HMM Match : Herpes_capsid (HMM E-Value=1.3) 33 0.19
SB_53356| Best HMM Match : OAR (HMM E-Value=2.8) 33 0.25
SB_52983| Best HMM Match : GntP_permease (HMM E-Value=1.2) 33 0.25
SB_39423| Best HMM Match : IncA (HMM E-Value=0.55) 33 0.25
SB_10772| Best HMM Match : TAFH (HMM E-Value=1.6) 33 0.25
SB_31443| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_53286| Best HMM Match : IncA (HMM E-Value=0.35) 33 0.33
SB_23870| Best HMM Match : ATP-synt_F (HMM E-Value=1.1) 33 0.33
SB_18994| Best HMM Match : Tim17 (HMM E-Value=4.2) 33 0.33
SB_7881| Best HMM Match : Gastrin (HMM E-Value=0.74) 33 0.33
SB_42319| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_29133| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_53653| Best HMM Match : IncA (HMM E-Value=1.4) 32 0.44
SB_44107| Best HMM Match : IncA (HMM E-Value=0.18) 32 0.44
SB_34791| Best HMM Match : IncA (HMM E-Value=0.21) 32 0.44
SB_27647| Best HMM Match : IncA (HMM E-Value=0.78) 32 0.44
SB_20855| Best HMM Match : IncA (HMM E-Value=0.9) 32 0.44
SB_14334| Best HMM Match : IncA (HMM E-Value=0.9) 32 0.44
SB_43174| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_34369| Best HMM Match : Herpes_US9 (HMM E-Value=0.64) 32 0.44
SB_57012| Best HMM Match : IncA (HMM E-Value=0.17) 32 0.58
SB_31571| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_23070| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_5590| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_58516| Best HMM Match : IncA (HMM E-Value=0.68) 32 0.58
SB_52805| Best HMM Match : Herpes_BFRF1 (HMM E-Value=2.6) 32 0.58
SB_12279| Best HMM Match : ATP-synt_F (HMM E-Value=1.3) 32 0.58
SB_11713| Best HMM Match : F5_F8_type_C (HMM E-Value=5e-13) 32 0.58
SB_372| Best HMM Match : CBM_2 (HMM E-Value=0.00043) 32 0.58
SB_59695| Best HMM Match : ATP-synt_F (HMM E-Value=0.77) 31 0.77
SB_53050| Best HMM Match : DUF1269 (HMM E-Value=1.8) 31 0.77
SB_34694| Best HMM Match : IncA (HMM E-Value=0.33) 31 0.77
SB_29696| Best HMM Match : Herpes_US9 (HMM E-Value=0.56) 31 0.77
SB_29563| Best HMM Match : IncA (HMM E-Value=0.37) 31 0.77
SB_28104| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_22799| Best HMM Match : OAR (HMM E-Value=3.1) 31 0.77
SB_58064| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_44642| Best HMM Match : DUF828 (HMM E-Value=0.79) 31 0.77
SB_12492| Best HMM Match : IncA (HMM E-Value=0.15) 31 0.77
SB_5731| Best HMM Match : OAR (HMM E-Value=2.8) 31 0.77
SB_5262| Best HMM Match : IncA (HMM E-Value=2.1) 31 0.77
SB_21353| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_16971| Best HMM Match : zf-C2H2 (HMM E-Value=5.8e-36) 31 1.0
SB_12814| Best HMM Match : IncA (HMM E-Value=1.7) 31 1.0
SB_9374| Best HMM Match : IncA (HMM E-Value=0.77) 31 1.0
SB_2656| Best HMM Match : IncA (HMM E-Value=1.7) 31 1.0
SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_33959| Best HMM Match : Herpes_US9 (HMM E-Value=2) 31 1.0
SB_30080| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_10457| Best HMM Match : IncA (HMM E-Value=1.6) 31 1.4
SB_8783| Best HMM Match : Herpes_capsid (HMM E-Value=0.97) 31 1.4
SB_472| Best HMM Match : Cas1p (HMM E-Value=0) 31 1.4
SB_34514| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_39571| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_13304| Best HMM Match : IncA (HMM E-Value=0.3) 30 1.8
SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_4044| Best HMM Match : IncA (HMM E-Value=0.44) 30 2.4
SB_14512| Best HMM Match : IncA (HMM E-Value=0.12) 29 3.1
SB_34579| Best HMM Match : IncA (HMM E-Value=0.99) 29 4.1
SB_45530| Best HMM Match : DnaB_C (HMM E-Value=0.89) 29 4.1
SB_19185| Best HMM Match : DUF1269 (HMM E-Value=0.28) 29 5.5
SB_20412| Best HMM Match : TUDOR (HMM E-Value=5.4) 28 7.2
SB_59745| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_14261| Best HMM Match : ig (HMM E-Value=0) 28 7.2
SB_58395| Best HMM Match : IncA (HMM E-Value=3.7) 28 9.5
SB_13012| Best HMM Match : TrbC (HMM E-Value=1.4) 28 9.5
SB_13834| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_26622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 633
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VGV + S + A H+D + +S S +N++ + + L+
Sbjct: 562 IGGPLAGVAGLIGVVGVGAGIVSKSLTSKVAKHEDTIVLSESKKNSISELVSKALQ 617
>SB_30655| Best HMM Match : DUF1279 (HMM E-Value=0.5)
Length = 692
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VGV + S + A H+D + +S S +N++ + + L+
Sbjct: 621 IGGPLAGVAGLIGVVGVGAGIVSKSLTSKVAKHEDTMVLSESKKNSISELVSKALQ 676
>SB_24063| Best HMM Match : OAR (HMM E-Value=2.8)
Length = 144
Score = 36.3 bits (80), Expect = 0.027
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -3
Query: 489 REGNRSSSVTVVLVAHSAGLDLRAVSDRGVGGELDNSAGVLGIVGVD-IQASTDNSSALH 313
R+ N +SS T L + G+ L + +GG L AG++G+VG + + A H
Sbjct: 51 RQRNNASS-TGALSSAGVGVSLSGIGVL-IGGPLVGVAGLVGVVGAGVVSRGLTSKVAKH 108
Query: 312 DDLVTVSRSSRNAVQDFDRRMLR 244
+D + ++ S +N++ + + L+
Sbjct: 109 EDTMVLAESKKNSISELVSKALQ 131
>SB_56950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
VGG L AG++G+VGV + + A H+D + +S S +N++ + + L+
Sbjct: 88 VGGRLAGIAGLIGVVGVGAGIVSRDLTSKVAKHEDTMVLSESKKNSISELVSKALQ 143
>SB_50121| Best HMM Match : DoxX (HMM E-Value=1.6)
Length = 338
Score = 35.1 bits (77), Expect = 0.063
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = -3
Query: 450 VAHSAGLDLRAVSDRGV--GGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSR 280
V SAGL + ++S GV GG L AG++G+VG + + A H+D + ++ S +
Sbjct: 200 VLSSAGLGV-SLSGIGVLIGGPLAGVAGLVGVVGAGAVSRGLTSKVAKHEDTMVLAESKK 258
Query: 279 NAVQDFDRRMLR 244
N++ + + L+
Sbjct: 259 NSISELVSKALQ 270
>SB_59013| Best HMM Match : DoxX (HMM E-Value=1.6)
Length = 338
Score = 35.1 bits (77), Expect = 0.063
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = -3
Query: 450 VAHSAGLDLRAVSDRGV--GGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSR 280
V SAGL + ++S GV GG L AG++G+VG + + A H+D + ++ S +
Sbjct: 200 VLSSAGLGV-SLSGIGVLIGGPLAGVAGLVGVVGAGAVSRGLTSKVAKHEDTMVLAESKK 258
Query: 279 NAVQDFDRRMLR 244
N++ + + L+
Sbjct: 259 NSISELVSKALQ 270
>SB_24460| Best HMM Match : DUF1393 (HMM E-Value=2.9)
Length = 152
Score = 34.7 bits (76), Expect = 0.083
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Frame = -3
Query: 456 VLVAHSAGLDLRAVSDRGV--GGELDNSAGVLGIVGVDI-QASTDNSS--ALHDDLVTVS 292
+ + SAG+ + ++S GV GG L AG++G+VGV S D +S A H+D + ++
Sbjct: 43 IRIIDSAGVGV-SLSGIGVLIGGPLAGIAGMIGVVGVGAGMVSRDLTSKVAKHEDTMVLA 101
Query: 291 RSSRNAVQDFDRRMLRR*SVL 229
+ +N++ + + L+ +L
Sbjct: 102 ENKKNSISELVSKALQNGHIL 122
>SB_4035| Best HMM Match : DUF1279 (HMM E-Value=0.15)
Length = 1575
Score = 34.7 bits (76), Expect = 0.083
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Frame = -3
Query: 498 QWEREGNRSSSVTVVLVAHSAGLDLRAVSDRG-----VGGELDNSAGVLGIVGVDIQA-- 340
Q ++ R+ +VT V+ ++G+ A+S G +GG L A ++G+VGV + A
Sbjct: 1407 QVRKKYKRAFAVTHA-VSVASGIAAGALSSAGWDRVLIGGPLAGDARLVGVVGVGVGAGI 1465
Query: 339 ---STDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
S + A H+D + +S S +N++ + + L+
Sbjct: 1466 VSRSLTSKVAKHEDTMVLSESKKNSISELVSKALQ 1500
>SB_1244| Best HMM Match : CbiZ (HMM E-Value=2.6)
Length = 192
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVDIQAS-TDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + +S A H+D + ++ S +N++ + + L+
Sbjct: 104 IGGPLAGVAGLVGVVGAGVVSSGLTGKVAKHEDAMVLAESKKNSISELVSKALQ 157
>SB_19211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVDIQAS-TDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + +S A H+D + ++ S +N++ + + L+
Sbjct: 104 IGGPLAGVAGLVGVVGAGVVSSGLTGKVAKHEDAMVLAESKKNSISELVSKALQ 157
>SB_15001| Best HMM Match : Calx-beta (HMM E-Value=0.023)
Length = 308
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = -3
Query: 441 SAGLDLRAVSDRGVGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAV 271
SAG+ L + VGG L AG++G+VGV + + A H+D + + S +N++
Sbjct: 65 SAGVSLSRIGVL-VGGPLAGVAGLVGVVGVGAGIVSRGLTSKVAKHEDTMVLPESKKNSI 123
Query: 270 QDFDRRMLR 244
+ + L+
Sbjct: 124 SELVSKALQ 132
>SB_11645| Best HMM Match : Herpes_US9 (HMM E-Value=0.39)
Length = 222
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = -3
Query: 441 SAGLDLRAVSDRGV--GGELDNSAGVLGIVGVDIQASTDNSS-ALHDDLVTVSRSSRNAV 271
SAGL + ++S GV G L AG++G+VG + + S A H+D V ++ S RN++
Sbjct: 87 SAGLGV-SLSGIGVLIGAPLAGVAGLVGVVGAGVVSRGLTSKVAKHEDTVVLAESKRNSI 145
Query: 270 QDFDRRMLR 244
+ + L+
Sbjct: 146 SELVSKALQ 154
>SB_27074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVDI-QASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG I + A H+D + ++ S++N++ + + L+
Sbjct: 104 IGGPLAGVAGLVGVVGAGIFSRGLTSKVAKHEDTMVLAESNKNSISELVSKALQ 157
>SB_20528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 637
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 441 SAGLDLRAVSDRGV--GGELDNSAGVLGIVGVD-IQASTDNSS--ALHDDLVTVSRSSRN 277
SAG+ + ++S GV GG L AG++G+VGV + AS +S A H+D + ++ S +N
Sbjct: 267 SAGMGV-SLSGIGVLIGGPLAEVAGLVGVVGVGAVVASRGLTSKVAKHEDTMVLAESKKN 325
Query: 276 AVQDFDRRMLR 244
++ + + L+
Sbjct: 326 SISELISKALQ 336
>SB_3749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVG-VDIQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG V + + A H+D + ++ S +N++ + + L+
Sbjct: 104 IGGPLAGVAGLVGVVGAVVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 157
>SB_30425| Best HMM Match : OAR (HMM E-Value=2.8)
Length = 334
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = -3
Query: 474 SSSVTVVLVAHSAGLDLRAVSDRGVGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVT 298
++S T L + G+ L + +GG L AG++G+VG + A H+D +
Sbjct: 250 NASSTGALSSAGVGVSLSGIGVL-IGGPLAGVAGLVGVVGAGVVSRGLTTKVAKHEDTMI 308
Query: 297 VSRSSRNAVQDFDRRMLR 244
++ S +N++ + + L+
Sbjct: 309 LAESKKNSISELVSKALQ 326
>SB_57163| Best HMM Match : 3HCDH_N (HMM E-Value=2.4)
Length = 303
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQD 265
VGG L AG++G+VGV + + A H+D V ++ S +N++ +
Sbjct: 81 VGGPLAGVAGLVGVVGVGAGIVSRGLTSRVAKHEDTVVLAESKKNSISE 129
>SB_13333| Best HMM Match : Herpes_capsid (HMM E-Value=1.3)
Length = 391
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
VGG L AG++G+VG + A H+D + ++ S +N++ + + L+
Sbjct: 249 VGGPLAGVAGLVGVVGAGVVSGGLTGKVAKHEDTMVLAESKKNSISELVSKALQ 302
>SB_53356| Best HMM Match : OAR (HMM E-Value=2.8)
Length = 125
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 4 IGGPLAGVAGLVGVVGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 57
>SB_52983| Best HMM Match : GntP_permease (HMM E-Value=1.2)
Length = 683
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 562 IGGPLAGVAGLVGVVGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 615
>SB_39423| Best HMM Match : IncA (HMM E-Value=0.55)
Length = 425
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 280 IGGPLAGVAGLVGVVGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 333
>SB_10772| Best HMM Match : TAFH (HMM E-Value=1.6)
Length = 188
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 42 IGGPLAGVAGLVGVVGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 95
>SB_31443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 305 IGGPLAGVAGLVGVVGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 358
>SB_53286| Best HMM Match : IncA (HMM E-Value=0.35)
Length = 200
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D ++ S +N++ + + L+
Sbjct: 79 IGGPLAGVAGLVGVVGAGVVSRGLTSKVAKHEDTTVLAESKKNSISELVSKALQ 132
>SB_23870| Best HMM Match : ATP-synt_F (HMM E-Value=1.1)
Length = 249
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AGV+G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 135 IGGPLAGFAGVVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSINELVSKALQ 190
>SB_18994| Best HMM Match : Tim17 (HMM E-Value=4.2)
Length = 255
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRML 247
+GG L AG++G+VG + + A H+D + ++ S +N++ + + L
Sbjct: 203 IGGPLAGVAGLVGVVGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKAL 255
>SB_7881| Best HMM Match : Gastrin (HMM E-Value=0.74)
Length = 192
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -3
Query: 456 VLVAHSAGLDLRAVSDRGVGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRS 286
VL + G+ L + VGG L AG++G+VG + + A H+D + ++ S
Sbjct: 81 VLSSAGVGVSLSGIGVL-VGGPLAGVAGLIGVVGAGAGIVSRGFTSKVAKHEDTMVLAES 139
Query: 285 SRNAVQDFDRRMLR 244
+N++ + + L+
Sbjct: 140 KKNSISELVSKALQ 153
>SB_42319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = -3
Query: 441 SAGLDLRAVSDRGV--GGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAV 271
SAG+ + ++S GV GG L AG++G+VG + A H+D + ++ S +N++
Sbjct: 300 SAGVGI-SLSGIGVLIGGPLAGVAGLVGVVGAGVVSRGFTTKVAKHEDTMVLAESKKNSI 358
Query: 270 QDFDRRMLR 244
+ + L+
Sbjct: 359 SELVSKALQ 367
>SB_29133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 239
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + A H+D + ++ S +N++ + + L+
Sbjct: 106 IGGPLAGVAGLVGVVGAGVVSRGLTTKVAKHEDTMVLAESKKNSISELVSKALQ 159
>SB_53653| Best HMM Match : IncA (HMM E-Value=1.4)
Length = 179
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQD 265
+GG L AG++G+VG + + A H+D + ++ S +N++ +
Sbjct: 60 IGGPLAGVAGLVGVVGAGVVSRGLTSKVAKHEDTMVLAESKKNSISE 106
>SB_44107| Best HMM Match : IncA (HMM E-Value=0.18)
Length = 335
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L+ AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 212 IGGPLEAVAGLVGVVGAGAGIVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 267
>SB_34791| Best HMM Match : IncA (HMM E-Value=0.21)
Length = 221
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
VGG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 98 VGGPLAGVAGLIGVVGAGAGIVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 153
>SB_27647| Best HMM Match : IncA (HMM E-Value=0.78)
Length = 183
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Frame = -3
Query: 450 VAHSAGLDLRAVSDRGVG----GELDNSAGVLGIVGVD-----IQASTDNSSALHDDLVT 298
V+ +G+ A+S GVG G L AG++GIVGV + + A H++ +
Sbjct: 71 VSLESGIAAGALSSAGVGVLIGGPLAGIAGLIGIVGVGAGAGIVSRGLTSKVAKHEETMV 130
Query: 297 VSRSSRNAVQDFDRRMLR 244
++ S +N++ + + L+
Sbjct: 131 LAESKKNSISELVSKALQ 148
>SB_20855| Best HMM Match : IncA (HMM E-Value=0.9)
Length = 225
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + A H+D + ++ S +N++ + + L+
Sbjct: 104 IGGPLAGVAGLVGVVGAGVVSRGLTTKVAKHEDTMVLAESRKNSISELVSKALQ 157
>SB_14334| Best HMM Match : IncA (HMM E-Value=0.9)
Length = 225
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + A H+D + ++ S +N++ + + L+
Sbjct: 104 IGGPLAGVAGLVGVVGAGVVSRGLTTKVAKHEDTMVLAESRKNSISELVSKALQ 157
>SB_43174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 79 IGGPLAGVAGLVGVVGAGVVSRGLTSKVAKHEDTMVLAESKKNSLSELVSKALQ 132
>SB_34369| Best HMM Match : Herpes_US9 (HMM E-Value=0.64)
Length = 361
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQD 265
+GG L AG++G+VG + A H+D + ++ S +N++ +
Sbjct: 304 IGGPLAGVAGLVGVVGAGVVSRGLTGKMAKHEDAMVLAESKKNSISE 350
>SB_57012| Best HMM Match : IncA (HMM E-Value=0.17)
Length = 537
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
VGG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 98 VGGPLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 153
>SB_31571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
VGG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 98 VGGPLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 153
>SB_23070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDR 256
VGG L AG++G+VG + + A H+D + ++ S +N++ + R
Sbjct: 341 VGGPLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVR 392
>SB_5590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Frame = -3
Query: 441 SAGLDLRAVSDRGV--GGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRN 277
SAG+ + ++S+ GV GG L AG++G+VG + + A H+D + ++ S +N
Sbjct: 90 SAGVGV-SLSEIGVLVGGPLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLADSKKN 148
Query: 276 AVQDFDRRMLR 244
++ + + L+
Sbjct: 149 SISELVSKALQ 159
>SB_58516| Best HMM Match : IncA (HMM E-Value=0.68)
Length = 245
Score = 31.9 bits (69), Expect = 0.58
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + ++ A H+D + ++ S +N++ + + L+
Sbjct: 104 IGGPLAGVAGLVGVVGAGAGVVSRGLTSNVAKHEDTMVLAESKKNSISELVSKALQ 159
>SB_52805| Best HMM Match : Herpes_BFRF1 (HMM E-Value=2.6)
Length = 309
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + + H+D + ++ S +N++ + + L+
Sbjct: 221 IGGPLAGVAGLVGVVGAGVVSRGLTSKVSKHEDTMVLAESKKNSISELVSKALQ 274
>SB_12279| Best HMM Match : ATP-synt_F (HMM E-Value=1.3)
Length = 142
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++GIVG + + A H+D + ++ S++N++ + + L+
Sbjct: 19 IGGPLAGVAGLVGIVGAGAGVVSRGLTSKVAKHEDKMVLAESNKNSISELVSKALQ 74
>SB_11713| Best HMM Match : F5_F8_type_C (HMM E-Value=5e-13)
Length = 516
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++GIVG + + A H+D + ++ S +N++ + + L+
Sbjct: 103 IGGPLAGLAGLVGIVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 158
>SB_372| Best HMM Match : CBM_2 (HMM E-Value=0.00043)
Length = 630
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVDIQA-----STDNSSALHDDLVTVSRSSRNAVQD 265
+GG L AG++G+VGV + A + A H+D + ++ S +N++ +
Sbjct: 104 IGGPLAGVAGLVGVVGVGVGAVVASRGLTSKVAKHEDTMVLAESKKNSISE 154
>SB_59695| Best HMM Match : ATP-synt_F (HMM E-Value=0.77)
Length = 229
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 106 IGGPLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 161
>SB_53050| Best HMM Match : DUF1269 (HMM E-Value=1.8)
Length = 305
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 194 IGGPLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 249
>SB_34694| Best HMM Match : IncA (HMM E-Value=0.33)
Length = 404
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQD 265
+GG L AG++G+VG + A H+D ++ S +N++ +
Sbjct: 283 IGGPLAGVAGLVGVVGAGVVSRGLTTKVAKHEDTTVLAESKKNSISE 329
>SB_29696| Best HMM Match : Herpes_US9 (HMM E-Value=0.56)
Length = 632
Score = 31.5 bits (68), Expect = 0.77
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = -3
Query: 441 SAGLDLRAVSDRGV--GGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRN 277
SAGL ++S GV GG L AG++G+VG + A H+D + ++ S +N
Sbjct: 495 SAGLGF-SLSRIGVLIGGPLAGFAGLVGVVGAGAGVVSRGLTTKVAKHEDTMVLAESKKN 553
Query: 276 AVQDFDRRMLR 244
++ + + L+
Sbjct: 554 SISELVSKALQ 564
>SB_29563| Best HMM Match : IncA (HMM E-Value=0.37)
Length = 223
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 104 IGGPLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 159
>SB_28104| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 285 IGGPLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 340
>SB_22799| Best HMM Match : OAR (HMM E-Value=3.1)
Length = 146
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 19 IGGPLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 74
>SB_58064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1027
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQD 265
+GG L AG++G+VG + A H+D ++ S +N++ +
Sbjct: 283 IGGPLAGVAGLVGVVGAGVVSRGLTTKVAKHEDTTVLAESKKNSISE 329
>SB_44642| Best HMM Match : DUF828 (HMM E-Value=0.79)
Length = 288
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + A H+D + ++ S +N++ + + L+
Sbjct: 175 IGGPLTGVAGLVGVVGAGAGVVSRGLTRKVAKHEDTMVLAESKKNSISELVSKALQ 230
>SB_12492| Best HMM Match : IncA (HMM E-Value=0.15)
Length = 497
Score = 31.5 bits (68), Expect = 0.77
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Frame = -3
Query: 441 SAGLDLRAVSDRGV--GGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRN 277
SAGL + ++S GV G L AG++G+VG D + + A H+D + ++ S +N
Sbjct: 226 SAGLGV-SLSGIGVLIGAPLAWVAGLVGVVGADAGVVSRGLTSKVAKHEDTMVLAESKKN 284
Query: 276 AVQDFDRRMLR 244
++ + + L+
Sbjct: 285 SISELVSKALQ 295
>SB_5731| Best HMM Match : OAR (HMM E-Value=2.8)
Length = 194
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 104 IGGPLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 159
>SB_5262| Best HMM Match : IncA (HMM E-Value=2.1)
Length = 597
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQD 265
+GG L AG++G+VG+ + + A H+D + ++ S +N++ +
Sbjct: 449 IGGPLAGVAGLIGVVGLGAGIVSRGLTSKVAKHEDTMVLAESKKNSISE 497
>SB_21353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + A H+D + ++ S +N++ + + L+
Sbjct: 601 IGGPLAGVAGLVGVVGAGAGVVSRGLTTKVAKHEDTMVLAESKKNSISELVSKALQ 656
>SB_16971| Best HMM Match : zf-C2H2 (HMM E-Value=5.8e-36)
Length = 477
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + A H+D + ++ S +N++ + + L+
Sbjct: 106 IGGPLAGVAGLVGVVGAGAWVVSMGLTTKVAKHEDTMVLAESKKNSISELVSKALQ 161
>SB_12814| Best HMM Match : IncA (HMM E-Value=1.7)
Length = 226
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + A H+D + ++ S +N++ + + L+
Sbjct: 103 IGGPLAGVAGLVGVVGAGAGVVSRGLTTKVAKHEDTMVLAESKKNSISELVSKALQ 158
>SB_9374| Best HMM Match : IncA (HMM E-Value=0.77)
Length = 227
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/56 (23%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG+L AG++G+VG + + A H+D + ++ + +N++ + + L+
Sbjct: 104 IGGQLAGVAGLVGVVGAGAGVVYRGLTSKVAKHEDTMVLAENKKNSISELVSKALQ 159
>SB_2656| Best HMM Match : IncA (HMM E-Value=1.7)
Length = 226
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + A H+D + ++ S +N++ + + L+
Sbjct: 103 IGGPLAGVAGLVGVVGAGAGVVSRGLTTKVAKHEDTMVLAESKKNSISELVSKALQ 158
>SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2124
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + A H+D + ++ S +N++ + + L+
Sbjct: 104 IGGPLAGVAGLVGVVGAGAGVVSRDLTTKVAKHEDTMVLAESKKNSISELVSKALQ 159
>SB_33959| Best HMM Match : Herpes_US9 (HMM E-Value=2)
Length = 363
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + A H+D + ++ S +N++ + + L+
Sbjct: 286 IGGPLAGVAGLVGVVGAGAGVVSRGLTTKVAKHEDTMVLAESKKNSISELVSKALQ 341
>SB_30080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VGV + + A H+D + ++ S ++++ + + L+
Sbjct: 90 IGGPLAGVAGLIGVVGVGAGIVSRGFTSKVAKHEDTMVLAESKKDSISELVSKALQ 145
>SB_10457| Best HMM Match : IncA (HMM E-Value=1.6)
Length = 216
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G++G + + A H+D + ++ S +N++ + + L+
Sbjct: 104 IGGPLAGVAGLVGVLGAGAGVVSRGLTSKMAKHEDTMVLAESKKNSISELVSKALQ 159
>SB_8783| Best HMM Match : Herpes_capsid (HMM E-Value=0.97)
Length = 275
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 106 IGGLLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 161
>SB_472| Best HMM Match : Cas1p (HMM E-Value=0)
Length = 932
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + + S +N++ + + L+
Sbjct: 411 IGGPLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLEESKKNSISELVSKDLK 466
>SB_34514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 102 IGGPRAGVAGLVGVVGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 155
>SB_39571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + + A H+D + + S +N++ + + L+
Sbjct: 103 IGGPLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVSAESKKNSISELVSKALQ 158
>SB_13304| Best HMM Match : IncA (HMM E-Value=0.3)
Length = 611
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -3
Query: 399 GGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
GG L AG++G+VG + + A H+D + ++ S +N++ + + L+
Sbjct: 407 GGPLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQ 461
>SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG+ G+VG + + A H+D + ++ S N++ + + L+
Sbjct: 433 IGGPLAGVAGLFGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKENSISELVSKALQ 488
>SB_4044| Best HMM Match : IncA (HMM E-Value=0.44)
Length = 222
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L A ++G+VGV + + A H+D + ++ S +N++ + + L+
Sbjct: 104 IGGPLTGVAVLVGVVGVGAGIVSRGLTSKVAKHEDAMVLAESKKNSISELVSKALQ 159
>SB_14512| Best HMM Match : IncA (HMM E-Value=0.12)
Length = 642
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG+ G+VG + A H+D + + S +N++ + + L+
Sbjct: 517 IGGPLAGVAGLGGVVGAGVVSRGLTTKVAKHEDTMVLVESKKNSISELVSKALQ 570
>SB_34579| Best HMM Match : IncA (HMM E-Value=0.99)
Length = 346
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG++G+VG + A H++ + ++ S +N++ + + L+
Sbjct: 223 IGGPLAGVAGLVGVVGAGAEVVSRGLTTKVAKHENTMVLAESKKNSISELVSKALQ 278
>SB_45530| Best HMM Match : DnaB_C (HMM E-Value=0.89)
Length = 396
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
VGG L AG+ G+VG + + A H+D + ++ S ++++ + + L+
Sbjct: 273 VGGPLAGVAGLTGVVGAGAGIVSRGLTSKVAKHEDTMVLAESKKSSISELVSKALQ 328
>SB_19185| Best HMM Match : DUF1269 (HMM E-Value=0.28)
Length = 407
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRNA 274
+GG L AG++G+VG + + A H+D + ++ S +N+
Sbjct: 286 IGGPLAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNS 331
>SB_20412| Best HMM Match : TUDOR (HMM E-Value=5.4)
Length = 231
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 538 CLKTKYVAIRRMWPVGERRK*IQLRYSCPCCT 443
C+K K+ +I + PVG RR + Y C T
Sbjct: 152 CIKLKHTSIHTLAPVGPRRDASTVYYPCSSAT 183
>SB_59745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = -3
Query: 402 VGGELDNSAGVLGIVGVD-----IQASTDNSSALHDDLVTVSRSSRNAVQDFDRRMLR 244
+GG L AG +G+VG + A H+D + ++ S +N++ + + L+
Sbjct: 106 IGGPLAGVAGQVGVVGAGAGAGVVSRGLTTKVAKHEDTMVLAESKKNSISELVSKALQ 163
>SB_14261| Best HMM Match : ig (HMM E-Value=0)
Length = 1337
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 597 MNVGLGVPNSVLSAP--NLVLTEKNSKEFIVNLS 692
+N+ + P S++ P N++LTE +SKE + N S
Sbjct: 687 LNIPVSEPPSIVQFPSKNIILTEGDSKELMCNAS 720
>SB_58395| Best HMM Match : IncA (HMM E-Value=3.7)
Length = 165
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = -3
Query: 441 SAGLDLRAVSDRGV--GGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSSRN 277
SAGL + ++S GV G L AG++G++G + + A H+D + ++ S +N
Sbjct: 28 SAGLGV-SLSGIGVLIGAPLAGVAGLVGVLGAGAGVVSRGLTSKVAKHEDTMVLAESKKN 86
Query: 276 AVQDFDRRMLR 244
+ + + L+
Sbjct: 87 STSELVSKALQ 97
>SB_13012| Best HMM Match : TrbC (HMM E-Value=1.4)
Length = 367
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = -3
Query: 453 LVAHSAGLDLRAVSDRGVGGELDNSAGVLGIVGVD---IQASTDNSSALHDDLVTVSRSS 283
L + AG+ L + +GG L AG++G+VG + + A H+D + ++ S
Sbjct: 286 LSSSGAGVSLSRIGVL-IGGPLAGFAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESK 344
Query: 282 RNAVQDFDRRMLR 244
+ + R+ +
Sbjct: 345 KTRSASWSLRLCK 357
>SB_13834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 170 DPFKSAKPPVECNTQDSINFNTLYL 244
DPF +P C +QD +N T YL
Sbjct: 63 DPFPGKQPESLCESQDELNTFTFYL 87
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,778,082
Number of Sequences: 59808
Number of extensions: 492333
Number of successful extensions: 1396
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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