Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1131
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm rece...    30   2.1  
Z81113-8|CAO82064.1|  138|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z81083-3|CAB03104.1|  559|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z73105-2|CAA97439.2|  803|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z50176-3|CAA90540.1|  196|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm
           receptor protein 86 protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 334 RTCLDVNPNDSQHTCRVVELASNTAIA 414
           R C+ +N ND Q +CR V+L     IA
Sbjct: 221 RCCVKLNKNDKQTSCRTVDLQKQLMIA 247


>Z81113-8|CAO82064.1|  138|Caenorhabditis elegans Hypothetical
           protein T03F6.9 protein.
          Length = 138

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 445 CNKDNCNGAGSISFSLPLATFV*SLRIS 528
           C KD CNGAG +S    +A F  S+ ++
Sbjct: 107 CGKDKCNGAGKVSTIFVVAMFSCSIIVA 134


>Z81083-3|CAB03104.1|  559|Caenorhabditis elegans Hypothetical
           protein F44F1.4 protein.
          Length = 559

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 443 CATRTTVTELDLFPSLSHW-PHSSDRYVFRFQTIISILYIFFTFSLTH 583
           C+ +  VTE DLFP  + W     D  +F F ++ + +  F     TH
Sbjct: 88  CSCQPDVTEKDLFPDYAVWCEEIEDHVIFAFNSMSNKMEQFVYSFETH 135


>Z73105-2|CAA97439.2|  803|Caenorhabditis elegans Hypothetical
           protein R13.4 protein.
          Length = 803

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 163 LRGPVQERQTPSRMQ-HPGFD*LQYALPAQHSPVEVLNSVTGAPRY 297
           +R PVQ    PS+M  HP    +QY    +  PV V   +  A +Y
Sbjct: 264 MRMPVQYPSGPSQMAGHPHMQQMQYGHMMRAPPVSVYGQMNNAQQY 309


>Z50176-3|CAA90540.1|  196|Caenorhabditis elegans Hypothetical
           protein C09G1.3 protein.
          Length = 196

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +1

Query: 373 TCRVVELASNTAIADSAKVKSCAVCNKDNCNGAGSISFSLPLATFV*SLRI 525
           +C+V++ A ++ +ADS K     VC   N      +     L  F   +RI
Sbjct: 51  SCKVIDWAESSRVADSLKRGDLQVCTPSNILPRNVVCSGAELFQFAEKIRI 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,590,652
Number of Sequences: 27780
Number of extensions: 374567
Number of successful extensions: 944
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)