Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1131
         (761 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g79680.1 68414.m09293 wall-associated kinase, putative simila...    29   2.6  
At1g71260.1 68414.m08224 expressed protein                             28   5.9  
At1g69260.1 68414.m07939 expressed protein                             28   5.9  
At1g13080.1 68414.m01516 cytochrome P450 family protein identica...    28   5.9  
At3g50050.1 68416.m05472 aspartyl protease family protein contai...    28   7.8  

>At1g79680.1 68414.m09293 wall-associated kinase, putative similar
           to wall-associated kinase 2 GI:4826399 from [Arabidopsis
           thaliana]
          Length = 769

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +1

Query: 391 LASNTAIADSAKVKSCAVCNKDNCNGAGSISFSLPLATFV*SLRISFSNNNFDS 552
           L  N    DS   K+ ++ N  +CNG G    SLP A +   + +   ++N +S
Sbjct: 168 LYCNARYGDSEYCKNISIMNDTSCNGIGCCKASLP-ARYQQIIGVEIDDSNTES 220


>At1g71260.1 68414.m08224 expressed protein
          Length = 238

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 603 VGLGVPNSVLSAPNLVLTEKNSKEFIVNLSSFSYICPHL 719
           + L V NS+L   +  +      EF V  ++FS+  PH+
Sbjct: 165 ISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHI 203


>At1g69260.1 68414.m07939 expressed protein
          Length = 345

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -3

Query: 498 QWEREGNRSSSVTVVLVAHSAGLDLRAVSDRGVGGELDNSAGVLGIVG-VDIQASTDNSS 322
           +W    N+S     +L  HSAGLD   VS   +GG    +AG    V  ++ +AS+D + 
Sbjct: 179 RWSATANKSG----LLRQHSAGLDSLQVSGESLGG--GRAAGSSSSVSELETKASSDEAR 232

Query: 321 AL 316
           +L
Sbjct: 233 SL 234


>At1g13080.1 68414.m01516 cytochrome P450 family protein identical
           to gb|D78605 cytochrome P450 monooxygenase from
           Arabidopsis thaliana and is a member of the PF|00067
           Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and
           gb|T43466 come from this gene
          Length = 502

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
 Frame = +1

Query: 229 QYALPAQHSPVEV---LNSVTGAPRYC-HKIVMKSGTVVRTCLDVNPNDSQHTCRVVELA 396
           ++ LP   S + +   L+ + G P  C HK+ +K G +V   L   P        VV ++
Sbjct: 28  KFNLPPSPSSLPIIGNLHHLAGLPHRCFHKLSIKYGPLVFLRLGSVP--------VVVIS 79

Query: 397 SNTAIADSAKVKSCAVCNKDNCNGAGSISFSLPLATF 507
           S+ A     K      C++    G+G +S+     TF
Sbjct: 80  SSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITF 116


>At3g50050.1 68416.m05472 aspartyl protease family protein contains
           Pfam PF00026: Eukaryotic aspartyl protease
          Length = 632

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +2

Query: 122 CIKCYQCNSEQDKNCGDPFKSAKPPVECN 208
           C  C QC   QD        S   PV+CN
Sbjct: 121 CSDCEQCGKHQDPKFQPEMSSTYQPVKCN 149


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,212,739
Number of Sequences: 28952
Number of extensions: 330252
Number of successful extensions: 837
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)