Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1129
         (699 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_03_0033 - 7248131-7248711,7248947-7249079,7249470-7249994,725...    30   2.0  
01_07_0197 + 41912207-41912652,41913226-41913800,41913828-419157...    29   3.5  
01_06_0513 - 29944888-29945943                                         29   4.7  
01_05_0013 - 17156017-17157647,17157977-17158144,17160064-171601...    29   4.7  
04_03_0059 - 10504901-10506127                                         28   6.2  
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417...    28   8.2  

>10_03_0033 -
           7248131-7248711,7248947-7249079,7249470-7249994,
           7250545-7250764,7250913-7251145
          Length = 563

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +1

Query: 400 SAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQWVRRRVSGYRARIRNHGHS 561
           S GL LN S+A+A   +       ++P   GG + WV    S    R+R HG S
Sbjct: 50  SGGLNLN-SQADA-FPDFASYQQIIQPGSLGGMRGWVPPGSSSSEGRVRGHGTS 101


>01_07_0197 +
           41912207-41912652,41913226-41913800,41913828-41915748,
           41915836-41916049,41916143-41916394,41916469-41916528,
           41916646-41916776,41916898-41917012,41917084-41917239
          Length = 1289

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 79  YKEFLARG-ARKVTTGITGLWQPSVHSDVAF*SFDVG 186
           YK F A G  RKV  GIT  + PS+  D+AF S  +G
Sbjct: 633 YKIFQAFGLVRKVEKGITRWYYPSMLDDLAFDSAALG 669


>01_06_0513 - 29944888-29945943
          Length = 351

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 527 PETRRRTHCLEPPDSRGSTVSISL-PDSARLASALEAFRHNPADGSSHHRPLGR 369
           P+TRR  H  EPP S     S  L  D A  A+A  A   +P+  SS   P  R
Sbjct: 6   PQTRRPIHLAEPPLSPEPNPSSPLMDDGAAPAAAAAAELPSPSPSSSGTSPSPR 59


>01_05_0013 -
           17156017-17157647,17157977-17158144,17160064-17160113,
           17160796-17160833,17161102-17161212
          Length = 665

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 427 KAEASLAESGKDMLTVEPRESGGSKQWVRRRVSGYRARIRNHGHSCFL 570
           K +A+ AE G+ ++     E  G  + +RRR+  Y    R HGH   L
Sbjct: 146 KGDAT-AEEGQQLVA---EEGAGKMKELRRRLVDYACHHRKHGHDALL 189


>04_03_0059 - 10504901-10506127
          Length = 408

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 514 RRVSGYRARIRNHGHSCFLCEIVI 585
           RRV G R   RNH H CF   I +
Sbjct: 226 RRVMGVRLGQRNHAHGCFYWMITL 249


>03_05_0520 +
           25139314-25139364,25139580-25139711,25141594-25141731,
           25143191-25143241,25143662-25143751,25143854-25144000,
           25144108-25144218,25144307-25144375,25144777-25145517,
           25145840-25146004,25146376-25146442,25146580-25146704,
           25148714-25148983,25149065-25149199,25149316-25149497,
           25149669-25149744
          Length = 849

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +3

Query: 303 VVAIVILLSTRGTAVSDIWFMHSAERPVVRTTIRGIMPERL*GRSQPSRI 452
           VV   I  ST   +VS    + S  RP+V TT   ++P  +  RS P  I
Sbjct: 308 VVPTTISTSTAAVSVS-AETISSPVRPIVPTTTAAVLPASVTARSAPENI 356


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,911,260
Number of Sequences: 37544
Number of extensions: 437198
Number of successful extensions: 1113
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)