Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1129
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   4.0  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   7.0  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   7.0  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   7.0  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 361 SCTRPSGRWCELPSAGLCL 417
           SC RP G  C  P  G C+
Sbjct: 594 SCDRPGGLLCSGPDHGRCV 612


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -3

Query: 616  PARMLCGIVSG*QFHTGNSYDHDYEFELGTPRRDVEPIV 500
            PARML G     Q H     D     EL  P R ++ ++
Sbjct: 1089 PARMLLGYFEMQQLHLDRLIDMLRVLELRDPIRSIDEMI 1127


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
 Frame = +1

Query: 526 GYRARIRNHGHSC----FLCEIVIRSQ 594
           GY  ++  H HSC    FLC  V   Q
Sbjct: 506 GYLIKLAQHSHSCLFGTFLCNTVKERQ 532


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
 Frame = +1

Query: 526 GYRARIRNHGHSC----FLCEIVIRSQ 594
           GY  ++  H HSC    FLC  V   Q
Sbjct: 506 GYLIKLAQHSHSCLFGTFLCNTVKERQ 532


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,405
Number of Sequences: 2352
Number of extensions: 15585
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)