Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1128
(677 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 27 0.16
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 26 0.38
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 24 1.2
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 23 2.0
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 2.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 3.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 3.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 3.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 3.5
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 6.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.2
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.2
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.2
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.2
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 27.1 bits (57), Expect = 0.16
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = -1
Query: 596 RKAGERGSGSSPKRKTIFASVILNIYSF*AALY*NTNSLNRILRTNIDQTRHRPHPLPV 420
R +R S +RK I S + N Y + Y N N+ N+ L NI+ P P+PV
Sbjct: 66 RSRDKRERERSKERKII--SSLSNNYISNISNYNNNNNYNKKLYYNINYIEQIPVPVPV 122
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 25.8 bits (54), Expect = 0.38
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -1
Query: 566 SPKRKTIFASVILNIYSF*AALY*NTNSLNRILRTNIDQTRHRPHPLPV 420
S +RK I S + N Y + Y N N+ N+ L NI+ P P+PV
Sbjct: 314 SKERKII--SSLSNNYISNISNYNNNNNYNKKLYYNINYIEQIPVPVPV 360
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -1
Query: 275 ATSPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFH 156
++S T+SP S + +R CS + P+ + FH
Sbjct: 324 SSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSPHQKKLRFH 363
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 23.4 bits (48), Expect = 2.0
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Frame = -1
Query: 287 VRTGATSPRTSSPEFSRSAESIRTPP----QMRCS---SRSEPYLPSIGFHGTRTLRQKR 129
++ TSP T+S E S SA ++ Q S + S P + R
Sbjct: 27 IQACTTSPATASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSASTSPAARTTS 86
Query: 128 KLFPDLSAASSGHFGLPRRTLVFKAEGTIIETVPLPGS 15
++P +SAA++ H ++ + A G VP GS
Sbjct: 87 SMYPYVSAAAAHHHHQQQQAVAAAAFGATSSMVPGFGS 124
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.4 bits (48), Expect = 2.0
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Frame = -1
Query: 275 ATSPRTSSPEFSRSAESIRTPP---QMRCSSRSEPYLP-SIGFHGTRTLRQKRKLFPDLS 108
A S TS+P F A+ P ++ + + P S+ F G Q PDL+
Sbjct: 284 AESEHTSTPNFLSEAKIFPPTPGSFNFSMAALATEHTPLSVKFPGMGHGLQP----PDLA 339
Query: 107 AASSGHFGLPRRTLVFKAEGTIIETVPLPG 18
S G GLP L + + + PG
Sbjct: 340 GTSQGSAGLPSAILAMRLSHPLHGNLLPPG 369
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 494 NTNSLNRILRTNIDQTRHRPHPLPV 420
N N+ N+ L NI+ P P+PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPVPV 124
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 494 NTNSLNRILRTNIDQTRHRPHPLPV 420
N N+ N+ L NI+ P P+PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPVPV 124
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 494 NTNSLNRILRTNIDQTRHRPHPLPV 420
N N+ N+ L NI+ P P+PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPVPV 124
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 494 NTNSLNRILRTNIDQTRHRPHPLPV 420
N N+ N+ L NI+ P P+PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPVPV 124
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 188 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 105
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 6.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 422 READAAGAGSGRCSCVIFGLAS*YFNIMRLK 514
R + A S SCVIFG+ F+ +R +
Sbjct: 2 RASSVLQAESDVSSCVIFGVLFVLFSFLRTR 32
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 6.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 422 READAAGAGSGRCSCVIFGLAS*YFNIMRLK 514
R + A S SCVIFG+ F+ +R +
Sbjct: 2 RASSVLQAESDVSSCVIFGVLFVLFSFLRTR 32
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LRIWVRTGATSPRTSSPEFSRSAESIRTP 213
++ W+ G T ++ S+ +++RTP
Sbjct: 513 IKEWIERGTTKSMEAANIMSKLPKTVRTP 541
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 494 NTNSLNRILRTNIDQTRHRPHPLPV 420
N N+ N+ L NI P P+PV
Sbjct: 104 NNNNYNKKLYYNIINIEQIPVPVPV 128
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 494 NTNSLNRILRTNIDQTRHRPHPLPV 420
N N+ N+ L NI P P+PV
Sbjct: 104 NNNNYNKKLYYNIINIEQIPVPVPV 128
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,469
Number of Sequences: 438
Number of extensions: 4817
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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