Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1126
         (747 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY157619-1|AAN65622.1| 2302|Homo sapiens ELYS transcription fact...    31   5.8  
AL080144-1|CAB45737.1|  745|Homo sapiens hypothetical protein pr...    31   5.8  
AB059277-1|BAB78516.1| 2266|Homo sapiens transcription factor EL...    31   5.8  

>AY157619-1|AAN65622.1| 2302|Homo sapiens ELYS transcription
            factor-like protein TMBS62 protein.
          Length = 2302

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 21/78 (26%), Positives = 31/78 (39%)
 Frame = -1

Query: 639  TNKTRTVSRAIVLNPRRTGRDALLREKCTSSRDVKRSRTVPTEKNARNERSVNI*THVNV 460
            T K   VS      PRR  R    +E      D+K S      +  R  RS N+    N 
Sbjct: 1894 TKKEVKVSSVTKRTPRRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENT 1953

Query: 459  RPRENDESLRSFIRVSQV 406
              +++D+S    +R+  V
Sbjct: 1954 GNKQDDKSSDKQLRIKHV 1971


>AL080144-1|CAB45737.1|  745|Homo sapiens hypothetical protein
           protein.
          Length = 745

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 21/78 (26%), Positives = 31/78 (39%)
 Frame = -1

Query: 639 TNKTRTVSRAIVLNPRRTGRDALLREKCTSSRDVKRSRTVPTEKNARNERSVNI*THVNV 460
           T K   VS      PRR  R    +E      D+K S      +  R  RS N+    N 
Sbjct: 337 TKKEVKVSSVTKRTPRRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENT 396

Query: 459 RPRENDESLRSFIRVSQV 406
             +++D+S    +R+  V
Sbjct: 397 GNKQDDKSSDKQLRIKHV 414


>AB059277-1|BAB78516.1| 2266|Homo sapiens transcription factor ELYS
            protein.
          Length = 2266

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 21/78 (26%), Positives = 31/78 (39%)
 Frame = -1

Query: 639  TNKTRTVSRAIVLNPRRTGRDALLREKCTSSRDVKRSRTVPTEKNARNERSVNI*THVNV 460
            T K   VS      PRR  R    +E      D+K S      +  R  RS N+    N 
Sbjct: 1858 TKKEVKVSSVTKRTPRRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENT 1917

Query: 459  RPRENDESLRSFIRVSQV 406
              +++D+S    +R+  V
Sbjct: 1918 GNKQDDKSSDKQLRIKHV 1935


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,746,214
Number of Sequences: 237096
Number of extensions: 2034187
Number of successful extensions: 5708
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5708
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)