Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1125
         (693 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p pro...    31   1.5  
AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-P...    31   1.5  
AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-P...    31   1.5  
DQ285411-1|ABB96223.1|  758|Drosophila melanogaster SIFamide rec...    29   7.9  
BT009988-1|AAQ22457.1|  758|Drosophila melanogaster RE47636p pro...    29   7.9  
AE014297-2972|AAN13859.2|  758|Drosophila melanogaster CG10823-P...    29   7.9  

>AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p
           protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 432 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 304
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-PD,
           isoform D protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 432 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 304
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-PA,
           isoform A protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 432 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 304
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>DQ285411-1|ABB96223.1|  758|Drosophila melanogaster SIFamide
           receptor protein.
          Length = 758

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -2

Query: 182 RRKCGALRVPNHISLL*DSMELERSGR-KENSSRTSRRRLQATLGYPVEHSFLKTRERLL 6
           R  CG LR  +++++   +    +S    +NSSR S       + Y  EH+ L+    +L
Sbjct: 512 RSCCGRLRYYDNVAIASSTTSTRKSSHYHQNSSRKSPSSKGNAVSYIYEHNSLRRHNMML 571

Query: 5   K 3
           K
Sbjct: 572 K 572


>BT009988-1|AAQ22457.1|  758|Drosophila melanogaster RE47636p
           protein.
          Length = 758

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -2

Query: 182 RRKCGALRVPNHISLL*DSMELERSGR-KENSSRTSRRRLQATLGYPVEHSFLKTRERLL 6
           R  CG LR  +++++   +    +S    +NSSR S       + Y  EH+ L+    +L
Sbjct: 512 RSCCGRLRYYDNVAIASSTTSTRKSSHYHQNSSRKSPSSKGNAVSYIYEHNSLRRHNMML 571

Query: 5   K 3
           K
Sbjct: 572 K 572


>AE014297-2972|AAN13859.2|  758|Drosophila melanogaster CG10823-PA,
           isoform A protein.
          Length = 758

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -2

Query: 182 RRKCGALRVPNHISLL*DSMELERSGR-KENSSRTSRRRLQATLGYPVEHSFLKTRERLL 6
           R  CG LR  +++++   +    +S    +NSSR S       + Y  EH+ L+    +L
Sbjct: 512 RSCCGRLRYYDNVAIASSTTSTRKSSHYHQNSSRKSPSSKGNAVSYIYEHNSLRRHNMML 571

Query: 5   K 3
           K
Sbjct: 572 K 572


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,989,144
Number of Sequences: 53049
Number of extensions: 738845
Number of successful extensions: 2259
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2257
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)