Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1124
         (762 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029926-1|ABM92800.1|  563|Drosophila melanogaster IP06983p pro...    31   2.3  
AY069650-1|AAL39795.1| 1075|Drosophila melanogaster LD41918p pro...    31   2.3  
AF245515-1|AAF73426.1| 1075|Drosophila melanogaster Ran binding ...    31   2.3  
AE014297-1345|AAN13522.1|  150|Drosophila melanogaster CG31389-P...    31   2.3  
AE013599-2096|AAF58114.2| 1075|Drosophila melanogaster CG33139-P...    31   2.3  

>BT029926-1|ABM92800.1|  563|Drosophila melanogaster IP06983p
           protein.
          Length = 563

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -2

Query: 458 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 354
           A  +T+NL +  FEF    PE FH    SLF+ LF
Sbjct: 378 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 409


>AY069650-1|AAL39795.1| 1075|Drosophila melanogaster LD41918p
           protein.
          Length = 1075

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -2

Query: 458 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 354
           A  +T+NL +  FEF    PE FH    SLF+ LF
Sbjct: 584 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 615


>AF245515-1|AAF73426.1| 1075|Drosophila melanogaster Ran binding
           protein 11 protein.
          Length = 1075

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -2

Query: 458 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 354
           A  +T+NL +  FEF    PE FH    SLF+ LF
Sbjct: 584 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 615


>AE014297-1345|AAN13522.1|  150|Drosophila melanogaster CG31389-PA
           protein.
          Length = 150

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 601 KSTTNGSRCITKREVHVFSGR*TFTYRADGEERTKRTFRQH 479
           K+  NG+R   +  V VF+G   F YR  G+E+ +R    H
Sbjct: 6   KNGMNGTRGAHEWRVMVFAGAQKFAYRMQGDEQQQRQQENH 46


>AE013599-2096|AAF58114.2| 1075|Drosophila melanogaster CG33139-PA
           protein.
          Length = 1075

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -2

Query: 458 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 354
           A  +T+NL +  FEF    PE FH    SLF+ LF
Sbjct: 584 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 615


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,175,725
Number of Sequences: 53049
Number of extensions: 678389
Number of successful extensions: 1859
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1857
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)