Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1123
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ267935-1|ABB89736.1| 2081|Homo sapiens dysferlin_v1 protein.         30   6.6  
AK074104-1|BAB84930.1| 1516|Homo sapiens FLJ00175 protein protein.     30   6.6  
AJ007670-1|CAA07603.1| 1413|Homo sapiens LGMD2B protein protein.       30   6.6  
AF075575-1|AAC63519.1| 2080|Homo sapiens dysferlin protein.            30   6.6  
AC010147-1|AAY14954.1| 1586|Homo sapiens unknown protein.              30   6.6  
AF058073-1|AAC15442.1|  108|Homo sapiens immunoglobulin lambda l...    30   8.7  
AF058071-1|AAC15440.1|  108|Homo sapiens immunoglobulin lambda l...    30   8.7  

>DQ267935-1|ABB89736.1| 2081|Homo sapiens dysferlin_v1 protein.
          Length = 2081

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 462  FTRNPSPRQSSRASLEYLLLPPRSAPTEAPSGSRPDPSALSVAHVLLV 319
            F R P   Q +  SLE  L  P SA + +P G   D S LS    +L+
Sbjct: 1412 FGRRPVVGQCTIRSLESFLCDPYSAESPSPQGGPDDVSLLSPGEDVLI 1459


>AK074104-1|BAB84930.1| 1516|Homo sapiens FLJ00175 protein protein.
          Length = 1516

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 462  FTRNPSPRQSSRASLEYLLLPPRSAPTEAPSGSRPDPSALSVAHVLLV 319
            F R P   Q +  SLE  L  P SA + +P G   D S LS    +L+
Sbjct: 959  FGRRPVVGQCTIRSLESFLCDPYSAESPSPQGGPDDVSLLSPGEDVLI 1006


>AJ007670-1|CAA07603.1| 1413|Homo sapiens LGMD2B protein protein.
          Length = 1413

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 462 FTRNPSPRQSSRASLEYLLLPPRSAPTEAPSGSRPDPSALSVAHVLLV 319
           F R P   Q +  SLE  L  P SA + +P G   D S LS    +L+
Sbjct: 848 FGRRPVVGQCTIRSLESFLCDPYSAESPSPQGGPDDVSLLSPGEDVLI 895


>AF075575-1|AAC63519.1| 2080|Homo sapiens dysferlin protein.
          Length = 2080

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 462  FTRNPSPRQSSRASLEYLLLPPRSAPTEAPSGSRPDPSALSVAHVLLV 319
            F R P   Q +  SLE  L  P SA + +P G   D S LS    +L+
Sbjct: 1411 FGRRPVVGQCTIRSLESFLCDPYSAESPSPQGGPDDVSLLSPGEDVLI 1458


>AC010147-1|AAY14954.1| 1586|Homo sapiens unknown protein.
          Length = 1586

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 462  FTRNPSPRQSSRASLEYLLLPPRSAPTEAPSGSRPDPSALSVAHVLLV 319
            F R P   Q +  SLE  L  P SA + +P G   D S LS    +L+
Sbjct: 917  FGRRPVVGQCTIRSLESFLCDPYSAESPSPQGGPDDVSLLSPGEDVLI 964


>AF058073-1|AAC15442.1|  108|Homo sapiens immunoglobulin lambda
           light chain VJ region protein.
          Length = 108

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +2

Query: 533 IIFKNNEK*RPLSERESGSYSGT 601
           +IFK++E+   + ER SGSYSGT
Sbjct: 46  VIFKDDERPSGIPERFSGSYSGT 68


>AF058071-1|AAC15440.1|  108|Homo sapiens immunoglobulin lambda
           light chain VJ region protein.
          Length = 108

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +2

Query: 533 IIFKNNEK*RPLSERESGSYSGT 601
           +IFK++E+   + ER SGSYSGT
Sbjct: 46  VIFKDDERPSGIPERFSGSYSGT 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,771,778
Number of Sequences: 237096
Number of extensions: 2443413
Number of successful extensions: 8614
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8613
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)