Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1122
(683 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 23 2.3
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 7.1
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 21 9.4
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 21 9.4
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 9.4
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 21 9.4
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 23.0 bits (47), Expect = 2.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 683 PLCVRASQMHQKSCTKLV*SFSLAGKYKLAILLS 582
P+C +SQ QK+C L ++ + G AIL S
Sbjct: 29 PVC--SSQKGQKTCLNLSINYCICGYIFSAILFS 60
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 201 IVATNLKNNLLITNSW 248
I+ + KN LLITN W
Sbjct: 40 IIDVDEKNQLLITNIW 55
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 201 IVATNLKNNLLITNSW 248
I+ + KN LLITN W
Sbjct: 40 IIDVDEKNQLLITNIW 55
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 201 IVATNLKNNLLITNSWPNV 257
I+ + KN +L TN+W N+
Sbjct: 40 IIDVDEKNQILTTNAWLNL 58
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 201 IVATNLKNNLLITNSWPNV 257
I+ + KN +L TN+W N+
Sbjct: 40 IIDVDEKNQILTTNAWLNL 58
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 201 IVATNLKNNLLITNSWPNV 257
I+ + KN +L TN+W N+
Sbjct: 40 IIDVDEKNQILTTNAWLNL 58
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.4 bits (43), Expect = 7.1
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 450 YILFHFVFVRFIKNSYFLVSISIFTTVHIIINFIPYTNY 566
++LF+ V + + YF + +F TVH+++ Y Y
Sbjct: 225 HLLFYCVLIILLCIYYFYYAFILF-TVHLLLLVCIYYFY 262
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 365 IVQIWRLGLDKFIKN 321
I+QIW G D ++N
Sbjct: 442 IIQIWTTGSDPQVRN 456
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 374 SLIIVQIWRLGLDKFIKN 321
++II+ IW FIKN
Sbjct: 206 AIIIITIWSKNAKGFIKN 223
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 140 NYISKNYFCETNNEI 184
NYIS F TNN I
Sbjct: 448 NYISPEVFPNTNNAI 462
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 140 NYISKNYFCETNNEI 184
NYIS F TNN I
Sbjct: 396 NYISPEVFPNTNNAI 410
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,019
Number of Sequences: 336
Number of extensions: 3053
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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