Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1121
(550 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 3.6
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 4.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.7
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 8.2
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 8.2
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 8.2
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 8.2
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 8.2
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 8.2
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 8.2
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 8.2
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 8.2
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 8.2
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 8.2
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 8.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 8.2
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 8.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.2
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 129 PDLSAASSGHFGLPRRTLVFK 67
PDL+ S G GLP L +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 4.7
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -2
Query: 198 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 115
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 4.7
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = -2
Query: 309 LRIWVRTGATSPRTSLT*ISRSAESIRTP 223
++ W+ G T + +S+ +++RTP
Sbjct: 513 IKEWIERGTTKSMEAANIMSKLPKTVRTP 541
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 175 RIPWNSNAQAEKKTLPGPLG 116
+IPW+ N +A K G G
Sbjct: 334 QIPWDKNVEALAKWANGQTG 353
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 504 NTNSLKRI*RTNIDQTRHRPHPLPV 430
N N+ K++ NI+ P P+PV
Sbjct: 103 NNNNYKKLQYYNINYIEQIPIPVPV 127
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 504 NTNSLKRI*RTNIDQTRHRPHPLPV 430
N N+ K++ NI+ P P+PV
Sbjct: 103 NNNNYKKLQYYNINYIEQIPIPVPV 127
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 504 NTNSLKRI*RTNIDQTRHRPHPLPV 430
N N+ K++ NI+ P P+PV
Sbjct: 103 NNNNYKKLQYYNINYIEQIPIPVPV 127
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 504 NTNSLKRI*RTNIDQTRHRPHPLPV 430
N N+ K++ NI+ P P+PV
Sbjct: 103 NNNNYKKLQYYNINYIEQIPIPVPV 127
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 8.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 504 NTNSLKRI*RTNIDQTRHRPHPLPV 430
N N+ K++ NI+ P P+PV
Sbjct: 93 NNNNYKKLQYYNINYIEQIPVPVPV 117
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 8.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 504 NTNSLKRI*RTNIDQTRHRPHPLPV 430
N N+ K++ NI+ P P+PV
Sbjct: 93 NNNNYKKLQYYNINYIEQIPVPVPV 117
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 8.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 504 NTNSLKRI*RTNIDQTRHRPHPLPV 430
N N+ K++ NI+ P P+PV
Sbjct: 93 NNNNYKKLQYYNINYIEQIPVPVPV 117
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 8.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 534 IYSF*GRII*NTNSLKRI*RTNIDQTRHRPHPLPV 430
I S I N N+ K++ NI+ P P+P+
Sbjct: 304 ISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPVPI 338
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 8.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 534 IYSF*GRII*NTNSLKRI*RTNIDQTRHRPHPLPV 430
I S I N N+ K++ NI+ P P+P+
Sbjct: 315 ISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPVPI 349
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 8.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 534 IYSF*GRII*NTNSLKRI*RTNIDQTRHRPHPLPV 430
I S I N N+ K++ NI+ P P+P+
Sbjct: 315 ISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPVPI 349
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 8.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 534 IYSF*GRII*NTNSLKRI*RTNIDQTRHRPHPLPV 430
I S I N N+ K++ NI+ P P+P+
Sbjct: 304 ISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPVPI 338
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.0 bits (42), Expect = 8.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 504 NTNSLKRI*RTNIDQTRHRPHPLPV 430
N N+ K++ NI+ P P+PV
Sbjct: 326 NNNNYKKLQYYNINYIEQIPVPVPV 350
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 84 DGVTQSGLKTPPRGPG 131
DG L +PPR PG
Sbjct: 128 DGPPSVSLSSPPREPG 143
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -2
Query: 447 PHPLPVQTRHAPVLRANPYSEV 382
P PLP A + + +PYS +
Sbjct: 652 PFPLPPNLASANISQLDPYSSL 673
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,153
Number of Sequences: 438
Number of extensions: 4153
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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