Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1120
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   3.0  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   5.2  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   9.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   9.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   9.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.1  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +2

Query: 422 DGN*VIIKTTVGIFKEPEKSRPRRLCFIFYNCVISKILNGQ*AIITY 562
           D N + +  T+G F     SRP+    I+  CV++ ++      I Y
Sbjct: 3   DHNLLRLIVTIGEFFAMTPSRPKTRAKIYALCVVTALVTPSALSIIY 49


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 446 FLLLLNSHHCIGSLFHLISYQYQILFQINNFISY 345
           FL +LNS H     FHL+     +    + F +Y
Sbjct: 97  FLTILNSMHKYQPRFHLVRANDILKLPYSTFRTY 130


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 121 LWSVKHNEERLWIKWSEGRL 180
           L  +K+N ER++  WS G L
Sbjct: 310 LRQMKNNLERIYFYWSFGFL 329


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 121 LWSVKHNEERLWIKWSEGRL 180
           L  +K+N ER++  WS G L
Sbjct: 310 LRQMKNNLERIYFYWSFGFL 329


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 121 LWSVKHNEERLWIKWSEGRL 180
           L  +K+N ER++  WS G L
Sbjct: 310 LRQMKNNLERIYFYWSFGFL 329


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 472  GFFKNPHSRFYYY 434
            GF ++PHS+F  Y
Sbjct: 1132 GFEESPHSKFLKY 1144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,253
Number of Sequences: 336
Number of extensions: 4216
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)