Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1120
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    23   6.5  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    23   6.5  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   8.7  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   8.7  

>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = -2

Query: 536 LVSLK*HNYRK*NIVAGDVTSRVL*KSPQSFLLLLNSHHCIGSLFHLISYQY 381
           L  LK H +R   ++A       L   PQ+F+  L  H  I      ++Y Y
Sbjct: 151 LKPLKVHEHRAVLMIAAAWIMSGLCSLPQAFIFHLEGHPNITGYQQCVTYHY 202


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = -2

Query: 536 LVSLK*HNYRK*NIVAGDVTSRVL*KSPQSFLLLLNSHHCIGSLFHLISYQY 381
           L  LK H +R   ++A       L   PQ+F+  L  H  I      ++Y Y
Sbjct: 151 LKPLKVHEHRAVLMIAAAWIMSGLCSLPQAFIFHLEGHPNITGYQQCVTYHY 202


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 151 LWIKWSEGRLSENDLKVIGARWS 219
           LWI W EG     +L ++ A WS
Sbjct: 370 LWISWEEGMKVFEEL-LLDADWS 391


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 239 SLPIYIQDHLAPITLRSFSDNLPSLH 162
           +LP Y Q    PITL    D  P LH
Sbjct: 620 TLPFYKQLLNKPITLSDIEDVDPDLH 645


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,143
Number of Sequences: 2352
Number of extensions: 16445
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)