Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1120
         (666 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   2.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   3.5  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   4.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   4.6  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   6.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   8.0  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 151 LWIKWSEGRLSENDLKVIGARWS 219
           LWI W EG    ++L ++ A WS
Sbjct: 387 LWISWEEGMKVFDEL-LLDADWS 408


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -2

Query: 254 KVYLESLPIYIQDHLAPITLRSFSDNLPSLHFIHNLSSLCLTDHRSGK 111
           KV +E L       L+ I L  F D L S H     +   + ++ SGK
Sbjct: 509 KVTIEILNSLSATKLSKIILMQFGDKLESSHDSFQAALRSIENYYSGK 556


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -2

Query: 254 KVYLESLPIYIQDHLAPITLRSFSDNLPSLHFIHNLSSLCLTDHRSGK 111
           KV +E L       L+ I L  F D L S H     +   + ++ SGK
Sbjct: 547 KVTIEILNSLSATKLSKIILMQFGDKLESSHDSFQAALRSIENYYSGK 594


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = -1

Query: 150 PLFVVFDGPQIRQIIRLHDIYEMFPPHLLQSEQTAVAFREIFNNL 16
           P+  VF    I  IIR +  Y + PP  + S       R+ + NL
Sbjct: 103 PMISVFSRQDIETIIRRNSRYPLRPPQEVISHYRRTR-RDRYTNL 146


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 604 FFCKMSNFVSFVC 642
           FFC MS  +S VC
Sbjct: 56  FFCDMSPLLSLVC 68


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 645 HTYK*HKV*HFTKKPTKCNIIY 580
           H  K H+V H+ +K  KC + +
Sbjct: 245 HVLKLHQVAHYGEKVYKCTLCH 266


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = -2

Query: 266 HTGEKVYLESLPIYIQDHLAPITLRSFSDNLPSLHFIHNLSSLCLTDHRSG 114
           H   K  L     +++  L  +T ++    L  LH +H LSS   T    G
Sbjct: 107 HAVHKEQLSREQRFLRRRLEQLTNQTGLHGLHGLHGLHGLSSSAPTGSSCG 157


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 501 KHSRRGRDFS 472
           KHSRR RDF+
Sbjct: 29  KHSRRHRDFT 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,915
Number of Sequences: 438
Number of extensions: 4695
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)