Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1119
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.2  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 284 LPQMHHSMSYITSDSRCSCP 343
           L Q +HS  +I  D R +CP
Sbjct: 215 LEQWNHSKVHIREDKRLTCP 234


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 49  EEVESLERQLALTQKALTQCKRKCDERIKR 138
           E +  + + +    K    C R  DE+IKR
Sbjct: 4   ENITDVLKHVWFLSKLFLLCPRSIDEKIKR 33


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 259 GSRPPGGCAPADAPQ 303
           G+R PG   PA+ PQ
Sbjct: 171 GTRIPGQLEPANVPQ 185


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 259 GSRPPGGCAPADAPQ 303
           G+R PG   PA+ PQ
Sbjct: 178 GTRIPGQLEPANVPQ 192


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +1

Query: 262 SRPPGGCAPADAPQH 306
           S  P G  P DAP H
Sbjct: 184 SSSPPGVFPVDAPMH 198


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 183 ADETLRQSYRAARP 224
           AD+T R+SY  A+P
Sbjct: 128 ADKTYRRSYTHAKP 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,381
Number of Sequences: 336
Number of extensions: 1741
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)