Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1119
(560 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 30 0.99
Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 30 1.3
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 28 4.0
U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 27 7.0
U40409-8|AAA81389.1| 156|Caenorhabditis elegans Hypothetical pr... 27 7.0
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 27 7.0
Z81077-3|CAB03067.1| 527|Caenorhabditis elegans Hypothetical pr... 27 9.2
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr... 27 9.2
U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like p... 27 9.2
AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like ... 27 9.2
>Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical
protein T04C10.4 protein.
Length = 208
Score = 30.3 bits (65), Expect = 0.99
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 22 LEVTNSELKEEVESLERQLALTQKALTQCKRK 117
L VTN +LK++V LER++ +K +T+ K
Sbjct: 173 LSVTNGKLKDQVSELEREIRYFKKFMTEMGMK 204
>Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical
protein T24H10.7d protein.
Length = 155
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +1
Query: 49 EEVESLERQLALTQKALTQCKRKCDERIKRMSHEL 153
+E + LER+ A ++A T+C++K +RIK + ++
Sbjct: 78 QEKKKLERKRARNRQAATKCRQKKMDRIKELEEQV 112
>Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical
protein T24H10.7c protein.
Length = 101
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +1
Query: 49 EEVESLERQLALTQKALTQCKRKCDERIKRMSHEL 153
+E + LER+ A ++A T+C++K +RIK + ++
Sbjct: 24 QEKKKLERKRARNRQAATKCRQKKMDRIKELEEQV 58
>Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical
protein T24H10.7b protein.
Length = 299
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +1
Query: 49 EEVESLERQLALTQKALTQCKRKCDERIKRMSHEL 153
+E + LER+ A ++A T+C++K +RIK + ++
Sbjct: 222 QEKKKLERKRARNRQAATKCRQKKMDRIKELEEQV 256
>Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +1
Query: 49 EEVESLERQLALTQKALTQCKRKCDERIKRMSHEL 153
+E + LER+ A ++A T+C++K +RIK + ++
Sbjct: 242 QEKKKLERKRARNRQAATKCRQKKMDRIKELEEQV 276
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 19 ELEVTNSELKEEVESLERQLALTQKALTQCKRKCDE 126
+L++ EL+ E+E R+ A TQK L RKC E
Sbjct: 1824 KLDMRIHELETELEGENRRHAETQKVLRNKDRKCRE 1859
>U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical
protein R07G3.6 protein.
Length = 304
Score = 27.9 bits (59), Expect = 5.3
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = -2
Query: 460 PALRGREVPAEARQVLVAPLVQPLEQVLDELAD 362
P L+G + P ++AP++ P+ +V D++ +
Sbjct: 23 PTLKGDKYPDVDAHRIIAPIISPIMEVFDQMKE 55
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +1
Query: 28 VTNSELKEEVESLERQL-ALTQKALTQCKRKCDE--RIKRMSHELS 156
+ E+KEE +ERQ+ + K L Q ++ DE R+K+ S +L+
Sbjct: 1869 LVKEEIKEEKALMERQINEMKAKHLQQTRKMADEILRLKQQSAQLA 1914
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +1
Query: 28 VTNSELKEEVESLERQL-ALTQKALTQCKRKCDE--RIKRMSHELS 156
+ E+KEE +ERQ+ + K L Q ++ DE R+K+ S +L+
Sbjct: 1869 LVKEEIKEEKALMERQINEMKAKHLQQTRKMADEILRLKQQSAQLA 1914
>U40409-8|AAA81389.1| 156|Caenorhabditis elegans Hypothetical
protein F32A6.1 protein.
Length = 156
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 22 LEVTNSELKEEVESLERQLALTQKALTQCKRKCDERIKRMSHELSI 159
+++ + E+E ++L K L R CD+RI + +EL+I
Sbjct: 39 IKMEADQFMAELERDNKRLVENVKELETTVRDCDDRIPELKNELAI 84
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 19 ELEVTNSELKEEVESLERQL 78
ELE N+EL +EV+SL R+L
Sbjct: 248 ELEKRNAELSKEVDSLRREL 267
>Z81077-3|CAB03067.1| 527|Caenorhabditis elegans Hypothetical
protein F36A2.2 protein.
Length = 527
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 94 LSASKLTVSPEIRPPPSARCW*PPTPGCS 8
LS +++ + +I+ PP ARC P GC+
Sbjct: 462 LSGARILEAKKIKFPPCARCGQPAGQGCA 490
>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
protein R09H3.1 protein.
Length = 1073
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 10 NNQELEVTNSELKEEVESLERQLALTQKALTQCKR--KCDERIKR 138
N E+ ++L+ EVE L+ +LAL + L + ++ K +E++ +
Sbjct: 155 NTNEIPNLENDLRAEVEKLKAELALKDENLKKAEQASKANEKVSK 199
>U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like
protein protein 6 protein.
Length = 928
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 49 EEVESLERQLALTQKALTQCKRKCDERI 132
EE+E L RQLA QK + + ++ ++I
Sbjct: 398 EEIEKLRRQLAENQKEMEEMEKSWQQKI 425
>AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like
protein KLP-6 protein.
Length = 928
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 49 EEVESLERQLALTQKALTQCKRKCDERI 132
EE+E L RQLA QK + + ++ ++I
Sbjct: 398 EEIEKLRRQLAENQKEMEEMEKSWQQKI 425
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,042,381
Number of Sequences: 27780
Number of extensions: 171155
Number of successful extensions: 705
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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