Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1118
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    25   2.0  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    25   2.0  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   6.1  
AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative odorant-b...    23   8.1  

>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -3

Query: 313 GRTESCRSRTKRN-RHDLTARRSAE 242
           GRTES  ++T+R  RH+   +++AE
Sbjct: 182 GRTESDNAKTRRRARHNTRTKKAAE 206


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -3

Query: 313 GRTESCRSRT-KRNRHDLTARRSAE 242
           GRTES  ++T +R RH+   +++AE
Sbjct: 182 GRTESDNAKTRRRTRHNTRTKKAAE 206


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 325 PLNGGRTESCRSRTKRNR 272
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


>AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative
           odorant-binding protein OBPjj11 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 341 HGQGESDCLI-KTKHCDGPRGC*RNVISAQC 430
           +GQ ++D L+ + ++ DGP  C R+    QC
Sbjct: 95  YGQEKADELVARCRNNDGPDACERSFRLLQC 125


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,037
Number of Sequences: 2352
Number of extensions: 14415
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)