Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1118
         (636 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p pro...    31   0.99 
AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA...    31   0.99 
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P...    29   5.3  
AY052005-1|AAK93429.1|  689|Drosophila melanogaster LD46952p pro...    29   7.0  
AE014297-1937|AAN13624.1|  689|Drosophila melanogaster CG6904-PC...    29   7.0  
AE014297-1936|AAN13623.1|  689|Drosophila melanogaster CG6904-PB...    29   7.0  
AE014297-1935|AAF55132.2|  709|Drosophila melanogaster CG6904-PA...    29   7.0  
AY075310-1|AAO39630.1|  145|Drosophila melanogaster AT31918p pro...    28   9.2  

>AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p
           protein.
          Length = 872

 Score = 31.5 bits (68), Expect = 0.99
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -3

Query: 325 PLNGGRTESCRSRTK-RNRHDLTARRSAEGRRTRVRIQS 212
           PL GGR+ S RSR++ R+R    +R    GR TR  ++S
Sbjct: 674 PLKGGRSSSSRSRSRSRSRSRSRSRNRRLGRSTRSSLRS 712


>AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA
           protein.
          Length = 872

 Score = 31.5 bits (68), Expect = 0.99
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -3

Query: 325 PLNGGRTESCRSRTK-RNRHDLTARRSAEGRRTRVRIQS 212
           PL GGR+ S RSR++ R+R    +R    GR TR  ++S
Sbjct: 674 PLKGGRSSSSRSRSRSRSRSRSRSRNRRLGRSTRSSLRS 712


>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
           protein.
          Length = 4129

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 126 TNITHEHRPDPAPDRIRFPSKPDTPRSSEPILIP 25
           T+   E  P P P  +  P+K  TP  SEP+  P
Sbjct: 452 TSPVKEVAPPPQPRAVASPAKEVTPSQSEPVKAP 485


>AY052005-1|AAK93429.1|  689|Drosophila melanogaster LD46952p
           protein.
          Length = 689

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 196 FRECHIKYIQFLRPHYIKILTR*NEHNARTSTRPGTGPHPLPVQTRH 56
           +R+  +K +Q + P Y+  L+     N    +RP + P P P  +RH
Sbjct: 616 YRQARVKALQAVYPDYVDELSLYGSKNNLIFSRPHSEP-PSPTSSRH 661


>AE014297-1937|AAN13624.1|  689|Drosophila melanogaster CG6904-PC,
           isoform C protein.
          Length = 689

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 196 FRECHIKYIQFLRPHYIKILTR*NEHNARTSTRPGTGPHPLPVQTRH 56
           +R+  +K +Q + P Y+  L+     N    +RP + P P P  +RH
Sbjct: 616 YRQARVKALQAVYPDYVDELSLYGSKNNLIFSRPHSEP-PSPTSSRH 661


>AE014297-1936|AAN13623.1|  689|Drosophila melanogaster CG6904-PB,
           isoform B protein.
          Length = 689

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 196 FRECHIKYIQFLRPHYIKILTR*NEHNARTSTRPGTGPHPLPVQTRH 56
           +R+  +K +Q + P Y+  L+     N    +RP + P P P  +RH
Sbjct: 616 YRQARVKALQAVYPDYVDELSLYGSKNNLIFSRPHSEP-PSPTSSRH 661


>AE014297-1935|AAF55132.2|  709|Drosophila melanogaster CG6904-PA,
           isoform A protein.
          Length = 709

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 196 FRECHIKYIQFLRPHYIKILTR*NEHNARTSTRPGTGPHPLPVQTRH 56
           +R+  +K +Q + P Y+  L+     N    +RP + P P P  +RH
Sbjct: 636 YRQARVKALQAVYPDYVDELSLYGSKNNLIFSRPHSEP-PSPTSSRH 681


>AY075310-1|AAO39630.1|  145|Drosophila melanogaster AT31918p
           protein.
          Length = 145

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -3

Query: 469 TRACLNFFTLTFRALGRNHIASTPARAIAMLCFN*TVGFPLSVPVL 332
           T AC+ + T+ F  +G  +IA+   +  A +     VGF L   VL
Sbjct: 17  TTACIFYITMCFMMIGCKYIANANPKRFAKIVHPSAVGFVLVGTVL 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,737,542
Number of Sequences: 53049
Number of extensions: 662226
Number of successful extensions: 2456
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2456
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)