Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1117
(309 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK125693-1|BAC86247.1| 321|Homo sapiens protein ( Homo sapiens ... 31 0.52
DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing pro... 28 4.8
CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein. 28 4.8
BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for IM... 28 4.8
BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open read... 28 4.8
AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I... 28 4.8
AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open read... 28 4.8
EF179181-1|ABN05284.1| 727|Homo sapiens LIM domain binding 3 pr... 28 6.4
AF276807-1|AAQ14316.1| 330|Homo sapiens Z-band alternatively sp... 28 6.4
AB014513-1|BAA31588.1| 734|Homo sapiens KIAA0613 protein protein. 28 6.4
DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated... 27 8.5
AK127686-1|BAC87084.1| 401|Homo sapiens protein ( Homo sapiens ... 27 8.5
AK124902-1|BAC85988.1| 1168|Homo sapiens protein ( Homo sapiens ... 27 8.5
>AK125693-1|BAC86247.1| 321|Homo sapiens protein ( Homo sapiens
cDNA FLJ43705 fis, clone TESOP2001818. ).
Length = 321
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 18 PIPEPGSGTVSIIVPSSLKTSVRRGNPKWXEDAAER 125
P+P G+ T ++PS+L+ ++ G P W ED+ R
Sbjct: 228 PLPPKGTETFFCVLPSALRAALSCG-PSWGEDSGPR 262
>DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing
protein protein.
Length = 208
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 12 PVPIPEPGSGTVSIIVPSSLKTSV 83
P P P PG T +++VPS T+V
Sbjct: 102 PGPYPGPGGHTATVLVPSGAATTV 125
>CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein.
Length = 208
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 12 PVPIPEPGSGTVSIIVPSSLKTSV 83
P P P PG T +++VPS T+V
Sbjct: 102 PGPYPGPGGHTATVLVPSGAATTV 125
>BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for
IMAGE:3350242) protein.
Length = 125
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 12 PVPIPEPGSGTVSIIVPSSLKTSV 83
P P P PG T +++VPS T+V
Sbjct: 19 PGPYPGPGGHTATVLVPSGAATTV 42
>BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 208
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 12 PVPIPEPGSGTVSIIVPSSLKTSV 83
P P P PG T +++VPS T+V
Sbjct: 102 PGPYPGPGGHTATVLVPSGAATTV 125
>AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I1
protein.
Length = 208
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 12 PVPIPEPGSGTVSIIVPSSLKTSV 83
P P P PG T +++VPS T+V
Sbjct: 102 PGPYPGPGGHTATVLVPSGAATTV 125
>AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 261
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 12 PVPIPEPGSGTVSIIVPSSLKTSV 83
P P P PG T +++VPS T+V
Sbjct: 102 PGPYPGPGGHTATVLVPSGAATTV 125
>EF179181-1|ABN05284.1| 727|Homo sapiens LIM domain binding 3
protein.
Length = 727
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -3
Query: 244 AESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSXHFGLPRRTLVFKD 65
A + P + SS+ Y IG + TLR+ +++ + GLP +L KD
Sbjct: 177 ARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLPIKD 236
>AF276807-1|AAQ14316.1| 330|Homo sapiens Z-band alternatively
spliced PDZ-motif protein ZASP-4 protein.
Length = 330
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -3
Query: 244 AESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSXHFGLPRRTLVFKD 65
A + P + SS+ Y IG + TLR+ +++ + GLP +L KD
Sbjct: 177 ARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLPIKD 236
>AB014513-1|BAA31588.1| 734|Homo sapiens KIAA0613 protein protein.
Length = 734
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -3
Query: 244 AESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSXHFGLPRRTLVFKD 65
A + P + SS+ Y IG + TLR+ +++ + GLP +L KD
Sbjct: 184 ARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLPIKD 243
>DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated
protein protein.
Length = 5005
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 256 ISRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASS 107
+SRS E++ P+ R S S PY PS + + Q R + +S A S
Sbjct: 1345 VSRSDENVLDSPKQRRSFGSFPYTPSA---DSNSFHQYRSMDSSMSMADS 1391
>AK127686-1|BAC87084.1| 401|Homo sapiens protein ( Homo sapiens
cDNA FLJ45784 fis, clone NETRP2006468. ).
Length = 401
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 256 ISRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASS 107
+SRS E++ P+ R S S PY PS + + Q R + +S A S
Sbjct: 331 VSRSDENVLDSPKQRRSFGSFPYTPSA---DSNSFHQYRSMDSSMSMADS 377
>AK124902-1|BAC85988.1| 1168|Homo sapiens protein ( Homo sapiens cDNA
FLJ42912 fis, clone BRHIP3024533. ).
Length = 1168
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 256 ISRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASS 107
+SRS E++ P+ R S S PY PS + + Q R + +S A S
Sbjct: 1098 VSRSDENVLDSPKQRRSFGSFPYTPSA---DSNSFHQYRSMDSSMSMADS 1144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,970,776
Number of Sequences: 237096
Number of extensions: 984269
Number of successful extensions: 3269
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3269
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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