Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1115
(745 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical p... 35 0.053
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 33 0.16
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 32 0.49
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 32 0.49
AL034393-27|CAH19090.1| 710|Caenorhabditis elegans Hypothetical... 30 1.5
AL008866-2|CAA15508.2| 710|Caenorhabditis elegans Hypothetical ... 30 1.5
Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 29 2.6
U50311-14|AAT92080.1| 75|Caenorhabditis elegans Hypothetical p... 29 4.6
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 4.6
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 29 4.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 4.6
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 4.6
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 28 6.1
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 28 6.1
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 6.1
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 28 6.1
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 28 8.0
AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical
protein F53F4.11 protein.
Length = 543
Score = 35.1 bits (77), Expect = 0.053
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +1
Query: 181 TCKKKSLVEGSHAAEPTQPKPMAPNRKHQLLIST-RPLT-TNPRFRPATEFLLAVTHHMT 354
T +KSL G P P P P+R + + T P T T P + A T
Sbjct: 38 TRAQKSLAAGGATPAPKTPAPKTPSRTTKSTVDTPAPKTPTRAAKTPVVKTPAAKTPAKK 97
Query: 355 ARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAED 465
A P ++ P+ + ED ++V ++ P +EV + E+
Sbjct: 98 A-PGVQTVPSSDEEEEDDELQVVKSVAPSVEVAKKEE 133
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/92 (26%), Positives = 33/92 (35%)
Frame = +1
Query: 205 EGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHMEVPPT 384
E P PM + ++ ++ P T PR P + T P+ E P T
Sbjct: 594 EAPMTVPPRTEPPMTEAPRTEVPMTEPPKTEPPRTAPPRTEVSMTLPPETVPPNTEAPRT 653
Query: 385 EVHQVEDPPMEVQQAEDPPMEVQQAEDPPMEV 480
EV P E + E P + E P EV
Sbjct: 654 EVPMTVPPRTEPPKTEAPRTVPPKTEAPMTEV 685
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/61 (31%), Positives = 22/61 (36%)
Frame = +1
Query: 286 PLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAED 465
P T PR P T RP E P T + E P E + E P E + E
Sbjct: 566 PRTEAPRTEPPRTEPPKTEAPRTVRPKTEAPMTVPPRTEPPMTEAPRTEVPMTEPPKTEP 625
Query: 466 P 468
P
Sbjct: 626 P 626
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +1
Query: 352 TARPHMEVPPTEVHQVEDP----PMEVQQAEDPPMEVQQAEDPPMEVAIHME 495
T P E P TE + E P P V+ + PM V +PPM A E
Sbjct: 563 TIPPRTEAPRTEPPRTEPPKTEAPRTVRPKTEAPMTVPPRTEPPMTEAPRTE 614
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +1
Query: 310 RPATEFLLAVT-HHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 477
+P T + T T P E P TE E P +E + E P E E P E
Sbjct: 355 KPTTTTVTTTTVPPKTDPPRTEPPKTEPPTTEPPKIEPPRTEPPKTEPPPTEPPKTE 411
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +1
Query: 226 PTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTE 387
PTQ P + ++ T P TT PR T T T P E PPTE
Sbjct: 286 PTQTPPTTTTTRRVTVVVTSPTTTTPRRTITTRIWTTTT---TQAPPTEAPPTE 336
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 361 PHMEVPPTEVHQVEDPPME--VQQAEDPPMEVQQAEDP 468
P V P+E HQ PP V +EDP V+ +EDP
Sbjct: 133 PQPSVEPSEDHQPSGPPSPGPVDPSEDPQPSVEPSEDP 170
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 31.9 bits (69), Expect = 0.49
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Frame = +1
Query: 160 SNCGTY--PTCKKKS--LVEGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEF 327
S CG+ P+C+++ ++ H EP P+ NR + P+++ PR+RP+
Sbjct: 36 SCCGSIRDPSCEEREEEYIDNGHDEEP----PVEVNRIQESTSFDEPVSSPPRYRPSENP 91
Query: 328 LLAVTH----HMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPM 444
+ + H + + + P ++ DPP+ V E+PP+
Sbjct: 92 GPSSSSYEPGHYSFNEYQQFPSRPQKRLVDPPI-VDLDEEPPI 133
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 31.9 bits (69), Expect = 0.49
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Frame = +1
Query: 160 SNCGTY--PTCKKKS--LVEGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEF 327
S CG+ P+C+++ ++ H EP P+ NR + P+++ PR+RP+
Sbjct: 36 SCCGSIRDPSCEEREEEYIDNGHDEEP----PVEVNRIQESTSFDEPVSSPPRYRPSENP 91
Query: 328 LLAVTH----HMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPM 444
+ + H + + + P ++ DPP+ V E+PP+
Sbjct: 92 GPSSSSYEPGHYSFNEYQQFPSRPQKRLVDPPI-VDLDEEPPI 133
>AL034393-27|CAH19090.1| 710|Caenorhabditis elegans Hypothetical
protein B0019.2 protein.
Length = 710
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/77 (22%), Positives = 31/77 (40%)
Frame = +1
Query: 226 PTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVED 405
P QP P + +H+ L+ T P ++ + RP P V + +
Sbjct: 488 PYQPPPGNSSYQHRGLLRTLGFGLTRNDLPGPSPPISTSRRSRGRPRKSAPEAHVAPITE 547
Query: 406 PPMEVQQAEDPPMEVQQ 456
E+ E+ P+E++Q
Sbjct: 548 KLEELLPVENEPIEIKQ 564
>AL008866-2|CAA15508.2| 710|Caenorhabditis elegans Hypothetical
protein B0019.2 protein.
Length = 710
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/77 (22%), Positives = 31/77 (40%)
Frame = +1
Query: 226 PTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVED 405
P QP P + +H+ L+ T P ++ + RP P V + +
Sbjct: 488 PYQPPPGNSSYQHRGLLRTLGFGLTRNDLPGPSPPISTSRRSRGRPRKSAPEAHVAPITE 547
Query: 406 PPMEVQQAEDPPMEVQQ 456
E+ E+ P+E++Q
Sbjct: 548 KLEELLPVENEPIEIKQ 564
>Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical
protein Y69H2.3d protein.
Length = 432
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +1
Query: 88 CRDIGCLNSEVCVLAEDPCTFGHTSNCGTYPTCKKKSLVEGSHAAEPTQPKPMAPN 255
CR C +E CVL + C + C PTC+ K L +P + + P+
Sbjct: 236 CRAQNCPYNEECVLVQVTCI---RAPCNPIPTCRPKDLRLIKPLIQPRERRQAGPS 288
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +1
Query: 88 CRDIGCLNSEVCVLAEDPCTFGHTSNCGTYPTCKKKSLVEGSHAAEPTQPKPMAPN 255
CR C +E CVL + C + C PTC+ K L +P + + P+
Sbjct: 341 CRAQNCPYNEECVLVQVTCI---RAPCNPIPTCRPKDLRLIKPLIQPRERRQAGPS 393
>U50311-14|AAT92080.1| 75|Caenorhabditis elegans Hypothetical
protein C25E10.13 protein.
Length = 75
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +1
Query: 85 TCRDIGCLNSEVCVLAEDPCTFGHTSNCGTYPTC 186
+C D+ C C PC G T C T P C
Sbjct: 40 SCEDVKCFGQNSCRTVAPPCIPGKT--CPTQPLC 71
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 394 QVEDPPMEVQQAEDPPMEVQQAEDPPMEVAIHMEA 498
+ DPP +A+DPP + PP + + +EA
Sbjct: 927 EASDPPSTSTEAQDPPKPSSSSAPPPPKKKLGLEA 961
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 88 CRDIGCLNSEVCVLAEDPCTFGHTSNCGTYPTCKKKSLVEG 210
C + C N++VC+L + C C PTC+K G
Sbjct: 1805 CEHVECPNAQVCILRKADCP---NKWCLPVPTCEKSPCNSG 1842
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/95 (23%), Positives = 36/95 (37%)
Frame = +1
Query: 223 EPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVE 402
E T P+P R H + + RP T R RP+ + RP+ P V + +
Sbjct: 1978 ENTAPQPTTYQRPHPIKVQVRPATKPYRPRPSP------APRIQPRPY-NPQPVVVQRPQ 2030
Query: 403 DPPMEVQQAEDPPMEVQQAEDPPMEVAIHMEAINI 507
P + + P Q + P + I A+ +
Sbjct: 2031 FRPQPQPRPQPQPQPQPQPQPQPQQPYIQRPALTL 2065
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 394 QVEDPPMEVQQAEDPPMEVQQAEDPPMEVAIHMEA 498
+ DPP +A+DPP + PP + + +EA
Sbjct: 927 EASDPPSTSTEAQDPPKPSSSSAPPPPKKKLGLEA 961
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Frame = +1
Query: 310 RPATEFLLAVTHHMTARPHMEVPPTEVHQVEDP------PMEVQQAEDP-PMEVQQAEDP 468
R A A++ RP + PP V Q P P+ V++A +P P V+Q P
Sbjct: 165 RTAASTRTAISAPPPPRPPPQEPPKPVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPP 224
Query: 469 PMEV 480
P V
Sbjct: 225 PAPV 228
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 376 PPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 477
PP + Q PP + QQ PP ++QQ PP++
Sbjct: 617 PPPQQSQQPIPPQQQQQPPAPPQQLQQ---PPVQ 647
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +1
Query: 178 PTCKKKSLVEGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNP--RFRPATEFLLAVTHHM 351
P KKK + +P+ PK AP+++H ++ P+ NP +++P E T +
Sbjct: 169 PVLKKKEPAAAAKPRDPS-PKKAAPSKEHDPIVPPTPI-KNPAKKWKPPWEDDEVPTEEI 226
Query: 352 TARPHMEVPPTEVHQVEDPPMEVQQAEDP 438
P + ++P V+ DP
Sbjct: 227 -KEPEPATRKVPALKKKEPSTSVKPVSDP 254
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 178 PTCKKKSLVEGSHAAEPTQPKPMAPNRKHQLLISTRPLTT 297
PT + VE +EP+ P P+AP + L ST P T
Sbjct: 231 PTTTRHFQVEPVVLSEPSTPAPVAPAPSIETLTSTSPPVT 270
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +1
Query: 343 HHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPMEVAIHME 495
H M M+ P + D M +QQ + PM Q ++ P + +H++
Sbjct: 854 HQMQQNRSMQQGPHNPQNIPDQMMNMQQMQQDPMSQQPLQESP-QPNLHLQ 903
>AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical
protein Y56A3A.4 protein.
Length = 342
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 367 MEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPM 474
M+V + HQ P ++QQ P + QQA P M
Sbjct: 183 MQVQHQQQHQQPPPSQQIQQPPIPQPQQQQAPPPQM 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,766,864
Number of Sequences: 27780
Number of extensions: 326659
Number of successful extensions: 1244
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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