Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1114
(681 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 26 0.38
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 26 0.38
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 26 0.38
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 26 0.38
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 26 0.38
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 26 0.38
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 1.2
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 2.7
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 2.7
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 2.7
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 2.7
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 3.6
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 3.6
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 3.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.6
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 3.6
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 4.7
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 4.7
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 6.2
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 22 6.2
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 8.2
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 642 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 544
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 642 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 544
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 642 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 544
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 642 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 544
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 642 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 544
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 642 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 544
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 642 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 544
RT SC SR + RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDLRHEDRNSYRNDGERSCSRDRS 258
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 642 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 544
RT SC SR + +RH+ +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDGNSYRNDGERSCSRDRS 258
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 631 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 530
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 631 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 530
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 631 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 530
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.6
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = -2
Query: 638 QNRADRARNETDTTYG*EDP-RKAGERGSGSSPKRKTIFASVI--LIYTVFEAALY*NTN 468
+ R R+R +Y E+ RK E S RK S +I ++ ++ N N
Sbjct: 36 RKRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNN 95
Query: 467 SLKRT*RTNIDQTRHRPHPLPV 402
+ K+ NI+ P P+PV
Sbjct: 96 NYKKLQYYNINYIEQIPVPVPV 117
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.6
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = -2
Query: 638 QNRADRARNETDTTYG*EDP-RKAGERGSGSSPKRKTIFASVI--LIYTVFEAALY*NTN 468
+ R R+R +Y E+ RK E S RK S +I ++ ++ N N
Sbjct: 36 RKRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNN 95
Query: 467 SLKRT*RTNIDQTRHRPHPLPV 402
+ K+ NI+ P P+PV
Sbjct: 96 NYKKLQYYNINYIEQIPVPVPV 117
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.6
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = -2
Query: 638 QNRADRARNETDTTYG*EDP-RKAGERGSGSSPKRKTIFASVI--LIYTVFEAALY*NTN 468
+ R R+R +Y E+ RK E S RK S +I ++ ++ N N
Sbjct: 36 RKRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNN 95
Query: 467 SLKRT*RTNIDQTRHRPHPLPV 402
+ K+ NI+ P P+PV
Sbjct: 96 NYKKLQYYNINYIEQIPVPVPV 117
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 3.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 408 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 506
K +RPV DV +C ++S LI LKN I
Sbjct: 42 KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 74
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 3.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 408 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 506
K +RPV DV +C ++S LI LKN I
Sbjct: 42 KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 74
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.6 bits (46), Expect = 3.6
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = -2
Query: 638 QNRADRARNETDTTYG*EDP-RKAGERGSGSSPKRKTIFASVI--LIYTVFEAALY*NTN 468
+ R R+R +Y E+ RK E S RK S +I ++ ++ N N
Sbjct: 269 RKRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNN 328
Query: 467 SLKRT*RTNIDQTRHRPHPLPV 402
+ K+ NI+ P P+PV
Sbjct: 329 NYKKLQYYNINYIEQIPVPVPV 350
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.2 bits (45), Expect = 4.7
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = -2
Query: 638 QNRADRARNETDTTYG*EDP-RKAGERGSGSSPKRKTIFASVI--LIYTVFEAALY*NTN 468
+ R R+R +Y E+ RK E S RK S +I ++ ++ N N
Sbjct: 36 RKRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNN 95
Query: 467 SLKRT*RTNIDQTRHRPHPLPV 402
+ K+ NI+ P P+P+
Sbjct: 96 NYKKLQYYNINYIEQIPVPVPI 117
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 101 PDLSAASSGHFGLPRRTLVFK 39
PDL+ S G GLP L +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -2
Query: 170 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 87
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 21.8 bits (44), Expect = 6.2
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 240 MYVEMRAGSYPYP 278
+Y +++ GSY YP
Sbjct: 120 LYAQIKTGSYDYP 132
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 655 VERRSYRIVPIAHETKPTRLTARKIRGRPEN 563
VE + Y+ V I+ T+P+ T + P N
Sbjct: 183 VEEQRYKQVEISQMTEPSSSTKSYVLEGPRN 213
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,642
Number of Sequences: 438
Number of extensions: 4859
Number of successful extensions: 28
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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