Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1108
         (662 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0ZIT6 Cluster: Transferase, hexapeptide repeat family ...    34   3.5  
UniRef50_UPI0000DC1FED Cluster: UPI0000DC1FED related cluster; n...    33   4.6  
UniRef50_Q8QNB5 Cluster: EsV-1-172; n=1; Ectocarpus siliculosus ...    33   6.1  
UniRef50_UPI00015A63B4 Cluster: UPI00015A63B4 related cluster; n...    33   8.1  

>UniRef50_A0ZIT6 Cluster: Transferase, hexapeptide repeat family
           protein; n=1; Nodularia spumigena CCY 9414|Rep:
           Transferase, hexapeptide repeat family protein -
           Nodularia spumigena CCY 9414
          Length = 209

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 505 GRHRVLGRECKVLLYNNIRCSSPNVLYDCDCYCTVN 612
           G+  +LG++C V    +IRCS  + ++D D  C +N
Sbjct: 126 GKKVILGKDCLVSYEVDIRCSDSHAVFDQDTKCRIN 161


>UniRef50_UPI0000DC1FED Cluster: UPI0000DC1FED related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC1FED UniRef100 entry -
           Rattus norvegicus
          Length = 239

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 21/72 (29%), Positives = 30/72 (41%)
 Frame = -2

Query: 619 ETDLLYNNNHNHTKH*GYYIECYCTVKLYIHVPAHGADR*QNIK*LHTSILSVIPIYTDI 440
           E+D  Y + H HT     YI  Y  +  ++H   H           HT I     IY  +
Sbjct: 63  ESDFTYTHTHTHTH---IYIYIYTLMCTHLHTHVHTYMHIHTHMYTHTHI-----IYMHV 114

Query: 439 STKQRTHIYLHT 404
            T   TH+++HT
Sbjct: 115 HTHIHTHVHIHT 126


>UniRef50_Q8QNB5 Cluster: EsV-1-172; n=1; Ectocarpus siliculosus
           virus 1|Rep: EsV-1-172 - Ectocarpus siliculosus virus 1
          Length = 809

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -2

Query: 409 HTTCPYESVKFEPNTRTVLKTNDNSIGIVEDCATRGFKKRI 287
           H TCP   VK E +T  V+   D+ IG+  D ++RG   R+
Sbjct: 603 HDTCPLCRVKMEGHTTAVI---DDRIGVASDASSRGQNTRV 640


>UniRef50_UPI00015A63B4 Cluster: UPI00015A63B4 related cluster; n=3;
           Danio rerio|Rep: UPI00015A63B4 UniRef100 entry - Danio
           rerio
          Length = 451

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = -2

Query: 655 IHFID-SFHNLK*ETDLLYNNNHNHTKH*GYYIECYCTVKLYIHVPAHGADR*QNIK*LH 479
           +H++D + +N +  T     + H H+     Y     T+K   H   H +D   +I   H
Sbjct: 30  LHYLDFNIYNYQTSTSTHIRHPHLHSTDIYIYTHQTSTIKPIRHPHIHPSDI--HIYTHH 87

Query: 478 TSILSVIPIYTDISTKQRTHIYLHTT 401
           TS  S + IYT  ++    HIY H T
Sbjct: 88  TST-STLHIYTQHTSTSTLHIYTHQT 112


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,820,322
Number of Sequences: 1657284
Number of extensions: 9686473
Number of successful extensions: 23667
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23583
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)