Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1108
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    32   0.014
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    24   3.7  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   4.9  
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    24   4.9  
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    24   4.9  
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    24   4.9  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    24   4.9  
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    24   4.9  
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...    24   4.9  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    24   4.9  
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    24   4.9  
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...    24   4.9  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    24   4.9  
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    24   4.9  
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    24   4.9  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 32.3 bits (70), Expect = 0.014
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +3

Query: 3   DDFLITDDPAAAKERGEVIKKRQEGEKKM 89
           D+F+IT+D   AK+    +K+ QEGEKK+
Sbjct: 325 DNFMITNDLEEAKKVAASVKETQEGEKKV 353


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = -3

Query: 276 AHY-VPRGINVLALTN*SQQPTAHRVPPQALRLQSHRRGPHHLPH 145
           AHY  P   +   +T+ +  P AH   P A    S   GP HL H
Sbjct: 185 AHYSAPIAHHAAPITHYAA-PIAHHAAPIAHSTSSIVHGPSHLSH 228


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 225 QQPTAHRVPPQALRLQSHRRGPHHLP 148
           QQ   H+  PQ    Q +   PHH P
Sbjct: 309 QQHHHHQHQPQQQHQQQYHSHPHHTP 334


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 219 PTAHRVPPQALRLQSHRRGPHHLPH 145
           P AH   P A    S   GP HL H
Sbjct: 205 PIAHHAAPIAHSTSSIVHGPSHLSH 229


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 219 PTAHRVPPQALRLQSHRRGPHHLPH 145
           P AH   P A    S   GP HL H
Sbjct: 204 PIAHHAAPIAHSTSSIVHGPSHLSH 228


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 219 PTAHRVPPQALRLQSHRRGPHHLPH 145
           P AH   P A    S   GP HL H
Sbjct: 204 PIAHHAAPIAHSTSSIVHGPSHLSH 228


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 219 PTAHRVPPQALRLQSHRRGPHHLPH 145
           P AH   P A    S   GP HL H
Sbjct: 207 PIAHHAAPIAHSTSSIVHGPSHLSH 231


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 219 PTAHRVPPQALRLQSHRRGPHHLPH 145
           P AH   P A    S   GP HL H
Sbjct: 212 PIAHHAAPIAHSTSSIVHGPSHLSH 236


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 219 PTAHRVPPQALRLQSHRRGPHHLPH 145
           P AH   P A    S   GP HL H
Sbjct: 204 PIAHHAAPIAHSTSSIVHGPSHLSH 228


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 219 PTAHRVPPQALRLQSHRRGPHHLPH 145
           P AH   P A    S   GP HL H
Sbjct: 212 PIAHHAAPIAHSTSSIVHGPSHLSH 236


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 219 PTAHRVPPQALRLQSHRRGPHHLPH 145
           P AH   P A    S   GP HL H
Sbjct: 236 PIAHHAAPIAHSTSSIVHGPSHLSH 260


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 219 PTAHRVPPQALRLQSHRRGPHHLPH 145
           P AH   P A    S   GP HL H
Sbjct: 204 PIAHHAAPIAHSTSSIVHGPSHLSH 228


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 219 PTAHRVPPQALRLQSHRRGPHHLPH 145
           P AH   P A    S   GP HL H
Sbjct: 205 PIAHHAAPIAHSTSSIVHGPSHLSH 229


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 219 PTAHRVPPQALRLQSHRRGPHHLPH 145
           P AH   P A    S   GP HL H
Sbjct: 204 PIAHHAAPIAHSTSSIVHGPSHLSH 228


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 219 PTAHRVPPQALRLQSHRRGPHHLPH 145
           P AH   P A    S   GP HL H
Sbjct: 212 PIAHHAAPIAHSTSSIVHGPSHLSH 236


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,538
Number of Sequences: 2352
Number of extensions: 11452
Number of successful extensions: 26
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)