Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1108
         (662 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033509-1|AAH33509.1|  283|Homo sapiens MDH1B protein protein.        30   8.5  
AK096940-1|BAC04906.1|  226|Homo sapiens protein ( Homo sapiens ...    30   8.5  

>BC033509-1|AAH33509.1|  283|Homo sapiens MDH1B protein protein.
          Length = 283

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = -1

Query: 296 KKNSPRTHTTYPEVLMSWHSLI 231
           + ++PRT+T +P +  SWHS++
Sbjct: 255 QSDTPRTNTLHPSIQSSWHSVL 276


>AK096940-1|BAC04906.1|  226|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39621 fis, clone SMINT2001158. ).
          Length = 226

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -1

Query: 536 LHSRPSTRCRPITKH*IITYINSERNPHLHGHQYETTDTYLLTHNMS 396
           +HS   T   P+T   I T   +  + H H H++  T T   TH ++
Sbjct: 105 IHSNTPTHTHPLTSTHIQTSTVTHTHSHTHAHKHTYTHTSTHTHPLT 151


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,149,954
Number of Sequences: 237096
Number of extensions: 1437034
Number of successful extensions: 6199
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6196
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)