Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1108
         (662 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-592|AAF45914.1|  402|Drosophila melanogaster CG15376-PA...    30   2.4  
X64461-1|CAA45791.1|  406|Drosophila melanogaster calreticulin p...    30   3.2  
BT001670-1|AAN71425.1|  406|Drosophila melanogaster RE50082p pro...    30   3.2  
AE014297-990|AAF54416.1|  406|Drosophila melanogaster CG9429-PA ...    30   3.2  
AB000718-1|BAA85379.1|  406|Drosophila melanogaster calreticulin...    30   3.2  

>AE014298-592|AAF45914.1|  402|Drosophila melanogaster CG15376-PA
           protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 506 PITKH*IITYINSERNPHLHGHQYETTDTYL 414
           P T H  ++Y +   +PH H H +E  D+Y+
Sbjct: 329 PYTVHHPVSYAHPHGHPHAHPHPHEHFDSYI 359


>X64461-1|CAA45791.1|  406|Drosophila melanogaster calreticulin
           protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 3   DDFLITDDPAAAKERGEVIKKRQEGEKKM 89
           D+ LITDD   A +    +K  Q GEKKM
Sbjct: 328 DNVLITDDVELAAKAAAEVKNTQAGEKKM 356


>BT001670-1|AAN71425.1|  406|Drosophila melanogaster RE50082p
           protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 3   DDFLITDDPAAAKERGEVIKKRQEGEKKM 89
           D+ LITDD   A +    +K  Q GEKKM
Sbjct: 328 DNVLITDDVELAAKAAAEVKNTQAGEKKM 356


>AE014297-990|AAF54416.1|  406|Drosophila melanogaster CG9429-PA
           protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 3   DDFLITDDPAAAKERGEVIKKRQEGEKKM 89
           D+ LITDD   A +    +K  Q GEKKM
Sbjct: 328 DNVLITDDVELAAKAAAEVKNTQAGEKKM 356


>AB000718-1|BAA85379.1|  406|Drosophila melanogaster calreticulin
           protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 3   DDFLITDDPAAAKERGEVIKKRQEGEKKM 89
           D+ LITDD   A +    +K  Q GEKKM
Sbjct: 328 DNVLITDDVELAAKAAAEVKNTQAGEKKM 356


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,182,469
Number of Sequences: 53049
Number of extensions: 498373
Number of successful extensions: 1562
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1562
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)