Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1106
         (653 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C0F6 Cluster: Putative uncharacterized protein; n=1; ...    70   4e-11
UniRef50_A3LSK3 Cluster: Predicted protein; n=7; Fungi/Metazoa g...    60   3e-08
UniRef50_Q59KL1 Cluster: Putative uncharacterized protein; n=1; ...    50   6e-05
UniRef50_A7RNM9 Cluster: Predicted protein; n=4; Eumetazoa|Rep: ...    44   0.003
UniRef50_A3LSK4 Cluster: Predicted protein; n=4; Ascomycota|Rep:...    44   0.003
UniRef50_Q6NKM5 Cluster: LD48059p; n=1; Drosophila melanogaster|...    44   0.004
UniRef50_Q652R5 Cluster: Putative uncharacterized protein P0603C...    41   0.030
UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;...    40   0.052
UniRef50_UPI0000F2E2E1 Cluster: PREDICTED: similar to SH2-B homo...    37   0.37 
UniRef50_Q7RAD4 Cluster: Putative uncharacterized protein PY0656...    34   2.6  
UniRef50_Q7RN94 Cluster: Putative uncharacterized protein PY0192...    34   3.4  
UniRef50_Q4J6R9 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_UPI0000F2EBE7 Cluster: PREDICTED: similar to COL5A2 pro...    33   6.0  
UniRef50_A0A3F1 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_A1SK23 Cluster: Diacylglycerol kinase, catalytic region...    33   7.9  
UniRef50_Q09JM0 Cluster: 10 kDa putative secreted protein; n=1; ...    33   7.9  

>UniRef50_Q5C0F6 Cluster: Putative uncharacterized protein; n=1;
           Schistosoma japonicum|Rep: Putative uncharacterized
           protein - Schistosoma japonicum (Blood fluke)
          Length = 102

 Score = 70.1 bits (164), Expect = 4e-11
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = +1

Query: 256 RTVAILTCKSIVGTGYRGERLIEPSSSWFRPKFPSG 363
           R+VA+LTCKS+V  GYRGERLIEPSSSWF PKFPSG
Sbjct: 67  RSVAVLTCKSVVRPGYRGERLIEPSSSWFPPKFPSG 102



 Score = 40.3 bits (90), Expect = 0.039
 Identities = 21/38 (55%), Positives = 25/38 (65%)
 Frame = +2

Query: 134 SHSRGVSFPISE*RRALSTNAGTRKMVNYAWSGRSQGK 247
           +H R VS P +  R + S    TRKMVNYAW+GRSQ K
Sbjct: 27  AHHRPVS-PAAPGRWSTSARVRTRKMVNYAWAGRSQRK 63


>UniRef50_A3LSK3 Cluster: Predicted protein; n=7; Fungi/Metazoa
           group|Rep: Predicted protein - Pichia stipitis (Yeast)
          Length = 94

 Score = 60.5 bits (140), Expect = 3e-08
 Identities = 31/51 (60%), Positives = 35/51 (68%)
 Frame = -1

Query: 572 TFGSSHSASSAYQNWPTWHRHRSPASSFE*AGVLTHLKFENRLRSFRPQCL 420
           TFGSS  ASSAYQ WPT         S +  G+LT+LKFENRLRSF+PQ L
Sbjct: 44  TFGSSRIASSAYQKWPTKSSSFICPRSIKQQGLLTYLKFENRLRSFQPQDL 94



 Score = 35.9 bits (79), Expect = 0.85
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 651 PWPPSCCHERPTPFMVSHERFLGALNYVW 565
           PWPPS C +  TPF+VS ER     N+ +
Sbjct: 17  PWPPSGCLDELTPFVVSDERVFRHFNFTF 45


>UniRef50_Q59KL1 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 108

 Score = 49.6 bits (113), Expect = 6e-05
 Identities = 26/34 (76%), Positives = 27/34 (79%), Gaps = 4/34 (11%)
 Frame = -2

Query: 328 MVRLVFRPYTQFRRSICTSESLRS----SSGFPL 239
           MVRLVFRPYTQ RRSICTSE LR+    SSGF L
Sbjct: 1   MVRLVFRPYTQIRRSICTSEPLRASTRVSSGFTL 34



 Score = 39.5 bits (88), Expect = 0.069
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = -1

Query: 251 RVSPDFDLTRHSSPSFGSQHLCS 183
           RVS  F L RHSSPSFGSQ LCS
Sbjct: 27  RVSSGFTLFRHSSPSFGSQQLCS 49


>UniRef50_A7RNM9 Cluster: Predicted protein; n=4; Eumetazoa|Rep:
           Predicted protein - Nematostella vectensis
          Length = 53

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 20/29 (68%), Positives = 20/29 (68%)
 Frame = -3

Query: 315 SFAPIPSSDDRFARQNRYGPHQGFP*LRP 229
           SFAPIP  DDRFARQNRY P   FP   P
Sbjct: 1   SFAPIPKFDDRFARQNRYEPPPEFPLASP 29



 Score = 36.7 bits (81), Expect = 0.49
 Identities = 18/43 (41%), Positives = 20/43 (46%)
 Frame = -2

Query: 313 FRPYTQFRRSICTSESLRSSSGFPLTST*PGIVHHLSGPSICA 185
           F P  +F               FPL S   GIVHHLSGP+ CA
Sbjct: 2   FAPIPKFDDRFARQNRYEPPPEFPLASPYSGIVHHLSGPNRCA 44


>UniRef50_A3LSK4 Cluster: Predicted protein; n=4; Ascomycota|Rep:
           Predicted protein - Pichia stipitis (Yeast)
          Length = 81

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 20/29 (68%), Positives = 20/29 (68%)
 Frame = -3

Query: 315 SFAPIPSSDDRFARQNRYGPHQGFP*LRP 229
           SFAPIP  DDRFARQNRY P   FP   P
Sbjct: 1   SFAPIPKFDDRFARQNRYEPPPEFPSASP 29


>UniRef50_Q6NKM5 Cluster: LD48059p; n=1; Drosophila
           melanogaster|Rep: LD48059p - Drosophila melanogaster
           (Fruit fly)
          Length = 46

 Score = 43.6 bits (98), Expect = 0.004
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = +1

Query: 184 EHKCWDPKDGELCLVRSKSGETLM 255
           EH C DPKDGEL L+R KSGETLM
Sbjct: 9   EHICCDPKDGELYLIRLKSGETLM 32


>UniRef50_Q652R5 Cluster: Putative uncharacterized protein
           P0603C10.50; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0603C10.50 - Oryza sativa subsp. japonica (Rice)
          Length = 248

 Score = 40.7 bits (91), Expect = 0.030
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = -1

Query: 365 YPEGNFGRNQLLDGSISLSPL 303
           YPEGNFG NQLLDGSI L P+
Sbjct: 19  YPEGNFGGNQLLDGSIGLIPI 39


>UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 440

 Score = 39.9 bits (89), Expect = 0.052
 Identities = 23/42 (54%), Positives = 25/42 (59%)
 Frame = -2

Query: 247 FPLTST*PGIVHHLSGPSICAQSAPSFTDWKRDASGVRKSRT 122
           FPL S  PGIVHHLSGP+  A+ AP      RD   VR  RT
Sbjct: 134 FPLASPCPGIVHHLSGPNAYAR-APPPRRGGRDGPVVRPRRT 174



 Score = 35.1 bits (77), Expect = 1.5
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -3

Query: 303 IPSSDDRFARQNRYGPHQGFP*LRP 229
           +  SDDRFARQ+RYGP   FP   P
Sbjct: 115 LTGSDDRFARQDRYGPPPEFPLASP 139


>UniRef50_UPI0000F2E2E1 Cluster: PREDICTED: similar to SH2-B
           homolog,; n=2; Mammalia|Rep: PREDICTED: similar to SH2-B
           homolog, - Monodelphis domestica
          Length = 394

 Score = 37.1 bits (82), Expect = 0.37
 Identities = 16/25 (64%), Positives = 18/25 (72%)
 Frame = -2

Query: 247 FPLTST*PGIVHHLSGPSICAQSAP 173
           FPL S  PGIVHHLSGP+  A + P
Sbjct: 71  FPLASPCPGIVHHLSGPNTHAHAPP 95



 Score = 36.3 bits (80), Expect = 0.64
 Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -3

Query: 369 QLS*GKLRTEPATRWF-D*SFAPIPS--SDDRFARQNRYGPHQGFP*LRP 229
           QLS  KL     TRW  D    P  +  SDDRFARQ+RYGP   FP   P
Sbjct: 28  QLS-SKLSYSGPTRWVPDSRVLPDTTMGSDDRFARQDRYGPPPEFPLASP 76


>UniRef50_Q7RAD4 Cluster: Putative uncharacterized protein PY06566;
           n=3; cellular organisms|Rep: Putative uncharacterized
           protein PY06566 - Plasmodium yoelii yoelii
          Length = 114

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = -1

Query: 362 PEGNFGRNQLLDGSISLSPLYPVPTIDLHV 273
           PE +F  NQL+  SISLSPL  +   DLHV
Sbjct: 45  PERSFENNQLIGFSISLSPLNVIEMNDLHV 74


>UniRef50_Q7RN94 Cluster: Putative uncharacterized protein PY01927;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01927 - Plasmodium yoelii yoelii
          Length = 193

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -1

Query: 353 NFGRNQLLDGSISLSPLYPVPTIDLHVRIATVL 255
           +F  NQL+  SISLSPL  +   DLHV I ++L
Sbjct: 149 SFENNQLIGFSISLSPLNVIEMNDLHVSINSIL 181


>UniRef50_Q4J6R9 Cluster: Putative uncharacterized protein; n=1;
           Sulfolobus acidocaldarius|Rep: Putative uncharacterized
           protein - Sulfolobus acidocaldarius
          Length = 136

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 23/65 (35%), Positives = 29/65 (44%)
 Frame = +2

Query: 377 YKILKQSHPVKRMIRGIGAETTSTYSQTLNG*ELRLTRTMKPEIDDGAKWANFGKQNWRC 556
           YKI +  +     IRG G  TT+T   TLNG E+      K E    A   N    + + 
Sbjct: 62  YKITENGYVATVQIRGPGVTTTTTTKSTLNGDEVTWEAEYKNEGSMVAMLGNLLDTSVQT 121

Query: 557 GMNQT 571
            MNQT
Sbjct: 122 MMNQT 126


>UniRef50_UPI0000F2EBE7 Cluster: PREDICTED: similar to COL5A2
           protein; n=9; Monodelphis domestica|Rep: PREDICTED:
           similar to COL5A2 protein - Monodelphis domestica
          Length = 774

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = -3

Query: 291 DDRFARQNRYGPHQGFP*LRP 229
           DDRFARQ+RYGP   FP   P
Sbjct: 20  DDRFARQDRYGPPPEFPLASP 40


>UniRef50_A0A3F1 Cluster: Putative uncharacterized protein; n=1;
           Lactobacillus salivarius subsp. salivarius UCC118|Rep:
           Putative uncharacterized protein - Lactobacillus
           salivarius subsp. salivarius (strain UCC118)
          Length = 305

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
 Frame = -1

Query: 563 SSHSASSAYQNWPTWHRHRSPASSFE*AG--VLTHLKFENRLRSFRPQCL*SFALPDETV 390
           ++  A  A    P  + H+S   +   +G  VLT+ + +N+ R++ P    SFA   ETV
Sbjct: 43  TTQKAQLANGQLPKANTHQSDGKTIVSSGTMVLTN-QDQNKNRNYLPWM--SFAATPETV 99

Query: 389 --LKFYIDASYPEGNFGRNQLLDGSISLSP 306
             LK++I   Y +GNF     LD    L+P
Sbjct: 100 TTLKYHIGEDYYDGNFRFTFYLDSIEGLAP 129


>UniRef50_A1SK23 Cluster: Diacylglycerol kinase, catalytic region;
           n=2; Actinomycetales|Rep: Diacylglycerol kinase,
           catalytic region - Nocardioides sp. (strain BAA-499 /
           JS614)
          Length = 291

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -2

Query: 307 PYTQFRRSICTSESLRSSSGFPLTST*PGIVHHLSGPSICAQSAPSFTDWKRDASG 140
           P  Q R ++ T   LR+ +  P T    G+ HHL    +   + PSF    R   G
Sbjct: 155 PKGQMRYNLATLAELRTFTPIPYTLDLDGVAHHLDAMLVAVGNGPSFGGGLRITEG 210


>UniRef50_Q09JM0 Cluster: 10 kDa putative secreted protein; n=1;
           Argas monolakensis|Rep: 10 kDa putative secreted protein
           - Argas monolakensis
          Length = 102

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +1

Query: 598 MGHHERRWSLMTAGRWPW 651
           M  HE  W L TAGRWPW
Sbjct: 1   MRSHEGCWLLRTAGRWPW 18


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,525,984
Number of Sequences: 1657284
Number of extensions: 13989368
Number of successful extensions: 28760
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 27643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28751
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)