Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1106
(653 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1) 46 2e-05
SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2) 34 0.12
SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59) 33 0.15
SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
>SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1)
Length = 276
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/64 (46%), Positives = 35/64 (54%)
Frame = -1
Query: 638 PAVMSDQRLSWCPMSVF*AP*TTFGSSHSASSAYQNWPTWHRHRSPASSFE*AGVLTHLK 459
P V SD+R W P F GSS ASS YQN PT R P + + G+LT+LK
Sbjct: 62 PFVGSDERRLWHPYRAF-------GSSRIASSGYQNGPTRTRIHCPGFNKQ-VGLLTNLK 113
Query: 458 FENR 447
FENR
Sbjct: 114 FENR 117
>SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 35.1 bits (77), Expect = 0.050
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 247 FPLTST*PGIVHHLSGPSICA 185
FPL S GIVHHLSGP+ CA
Sbjct: 9 FPLASPYSGIVHHLSGPNRCA 29
>SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 61 FGSSRIASSAYQKWPTRNSH 80
>SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 58 FGSSRIASSAYQKWPTRNSH 77
>SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 21 FGSSRIASSAYQKWPTRNSH 40
>SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 21 FGSSRIASSAYQKWPTRNSH 40
>SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 59 FGSSRIASSAYQKWPTRNSH 78
>SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 21 FGSSRIASSAYQKWPTRNSH 40
>SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 59 FGSSRIASSAYQKWPTSNSH 78
>SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -1
Query: 251 RVSPDFDLTRHSSPSFGSQHLCS 183
RVS F L RHSSPSFGSQ + S
Sbjct: 42 RVSSGFTLFRHSSPSFGSQQMRS 64
>SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 21 FGSSRIASSAYQKWPTRNSH 40
>SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 21 FGSSRIASSAYQKWPTRNSH 40
>SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 21 FGSSRIASSAYQKWPTKNSH 40
>SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 21 FGSSRIASSAYQKWPTRNSH 40
>SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2)
Length = 125
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 100 FGSSRIASSAYQKWPTRNSH 119
>SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 21 FGSSRIASSAYQKWPTRNSH 40
>SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 21 FGSSRIASSAYQKWPTRNSH 40
>SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 21 FGSSRIASSAYQKWPTRNSH 40
>SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 21 FGSSRIASSAYQKWPTRNSH 40
>SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 21 FGSSRIASSAYQKWPTRNSH 40
>SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 21 FGSSRIASSAYQKWPTRNSH 40
>SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 21 FGSSRIASSAYQKWPTRNSH 40
>SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ WPT + H
Sbjct: 143 FGSSRIASSAYQKWPTRNSH 162
>SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59)
Length = 1060
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 578 KAPKKRSWDTMKGVGRS*QQDGGHG 652
+ +RS D KGVG S QQDGGHG
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHG 34
>SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 578 KAPKKRSWDTMKGVGRS*QQDGGHG 652
+ +RS D KGVG S QQDGGHG
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHG 34
>SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 578 KAPKKRSWDTMKGVGRS*QQDGGHG 652
+ +RS D KGVG S QQDGGHG
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHG 34
>SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
+GSS ASSAYQ WPT + H
Sbjct: 21 YGSSRIASSAYQKWPTRNSH 40
>SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 320 ISLSPLYPVPTIDLHVR 270
ISLSPLYP TIDLHVR
Sbjct: 38 ISLSPLYPNLTIDLHVR 54
>SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 33
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +3
Query: 591 NAHGTP*KALVAHDSRTVAME 653
+AH TP K LVA DSRTVAME
Sbjct: 9 DAHQTPQKVLVALDSRTVAME 29
>SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPT 522
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRHRSPAS 495
FGSS ASSAYQN P R PAS
Sbjct: 21 FGSSRIASSAYQNGPLGTRIHCPAS 45
>SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSA Q WPT + H
Sbjct: 78 FGSSRIASSALQKWPTRNSH 97
>SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRH 510
FGSS ASSAYQ PT + H
Sbjct: 21 FGSSRIASSAYQKGPTRNSH 40
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -1
Query: 560 SHSASSAYQNWPTWHRHRSPASSFE*AGVL 471
S S SS WP W R RSPASS + G L
Sbjct: 2532 SFSESSTNGEWP-WGRRRSPASSNDSYGKL 2560
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,352,092
Number of Sequences: 59808
Number of extensions: 433134
Number of successful extensions: 1034
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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