Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1100
(770 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 184 1e-48
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 176 2e-46
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 170 1e-44
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 97 2e-22
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 1.8
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 1.8
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 1.8
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.4
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 23 3.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.1
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 184 bits (447), Expect = 1e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = -2
Query: 760 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIV 581
TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIV
Sbjct: 287 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIV 346
Query: 580 LNHPGQISNGYTPVLDCHTAHIAC 509
LNHPGQISNGYTPVLDCHTAHIAC
Sbjct: 347 LNHPGQISNGYTPVLDCHTAHIAC 370
Score = 140 bits (339), Expect = 1e-35
Identities = 70/89 (78%), Positives = 76/89 (85%), Gaps = 1/89 (1%)
Frame = -1
Query: 527 HCPH-CLQFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGR 351
H H +FA+IKEK DRR GK+TE NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGR
Sbjct: 364 HTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGR 423
Query: 350 FAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
FAVRDMRQTVAVGVIKAV FK+A GKVT
Sbjct: 424 FAVRDMRQTVAVGVIKAVTFKDA-AGKVT 451
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 176 bits (428), Expect = 2e-46
Identities = 79/84 (94%), Positives = 82/84 (97%)
Frame = -2
Query: 760 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIV 581
TEVKSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIV
Sbjct: 287 TEVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIV 346
Query: 580 LNHPGQISNGYTPVLDCHTAHIAC 509
LNHPGQISNGYTPVLDCHTAHIAC
Sbjct: 347 LNHPGQISNGYTPVLDCHTAHIAC 370
Score = 138 bits (333), Expect = 7e-35
Identities = 69/89 (77%), Positives = 76/89 (85%), Gaps = 1/89 (1%)
Frame = -1
Query: 527 HCPH-CLQFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGR 351
H H +FAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGR
Sbjct: 364 HTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGR 423
Query: 350 FAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
FAVRDMRQTVAVGVIK+V FK+ GKVT
Sbjct: 424 FAVRDMRQTVAVGVIKSVTFKDT-QGKVT 451
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 170 bits (414), Expect = 1e-44
Identities = 76/81 (93%), Positives = 79/81 (97%)
Frame = -2
Query: 751 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 572
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 571 PGQISNGYTPVLDCHTAHIAC 509
PGQISNGYTPVLDCHTAHIAC
Sbjct: 61 PGQISNGYTPVLDCHTAHIAC 81
Score = 65.7 bits (153), Expect = 5e-13
Identities = 33/45 (73%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Frame = -1
Query: 527 HCPH-CLQFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 396
H H +FAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 75 HTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 96.7 bits (230), Expect = 2e-22
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = -2
Query: 760 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 626
TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 230 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 185 KYRSCMKNCAVNSSSYFLPLVAF 253
K+ C+KN A SSYF+ + F
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYF 116
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 185 KYRSCMKNCAVNSSSYFLPLVAF 253
K+ C+KN A SSYF+ + F
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYF 121
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 185 KYRSCMKNCAVNSSSYFLPLVAF 253
K+ C+KN A SSYF+ + F
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYF 121
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 146 CSPFFLRNTFR*MKYRSCMKN 208
C FF R+ + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = -1
Query: 554 RLHTSLGLPHCPHC-LQFAEI 495
RLHT HC HC QF ++
Sbjct: 30 RLHTGEKPYHCSHCDRQFVQV 50
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 673 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 566
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,030
Number of Sequences: 438
Number of extensions: 4630
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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