Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1099
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein. 40 0.010
U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein. 40 0.010
BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing transcrip... 40 0.010
AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing transcrip... 40 0.010
D80003-1|BAA11498.2| 2079|Homo sapiens KIAA0181 protein. 33 1.2
BC126902-1|AAI26903.1| 186|Homo sapiens VCX3A protein protein. 33 1.2
AL109824-4|CAB92721.2| 2063|Homo sapiens nuclear receptor coacti... 33 1.2
AF245115-1|AAF78480.1| 2063|Homo sapiens nuclear receptor coacti... 33 1.2
AF208227-1|AAF16403.1| 2001|Homo sapiens transcriptional coactiv... 33 1.2
AF177388-1|AAF13595.1| 2063|Homo sapiens cancer-amplified transc... 33 1.2
AF171667-1|AAF71829.1| 2063|Homo sapiens thyroid hormone recepto... 33 1.2
AF128458-1|AAF37003.1| 2063|Homo sapiens nuclear receptor coacti... 33 1.2
AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 32 2.0
Z74477-2|CAI41996.1| 352|Homo sapiens testis expressed 13A prot... 31 3.6
X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein. 31 3.6
BC105110-1|AAI05111.1| 560|Homo sapiens MST101 protein protein. 31 3.6
BC035076-1|AAH35076.2| 571|Homo sapiens MST101 protein protein. 31 3.6
AF167081-1|AAG41767.1| 206|Homo sapiens variably charged X-B1 p... 31 3.6
AF159129-1|AAF28174.1| 206|Homo sapiens variable charge protein... 31 3.6
AB067522-1|BAB67828.1| 441|Homo sapiens KIAA1935 protein protein. 31 3.6
BC038449-1|AAH38449.1| 1139|Homo sapiens MGA protein protein. 30 6.2
AK025751-1|BAB15232.1| 674|Homo sapiens protein ( Homo sapiens ... 30 6.2
AK022696-1|BAB14186.1| 938|Homo sapiens protein ( Homo sapiens ... 30 6.2
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 30 6.2
X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor rec... 30 8.2
M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor rec... 30 8.2
M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor rec... 30 8.2
M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein. 30 8.2
M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor rec... 30 8.2
M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor nec... 30 8.2
BX641155-1|CAE46068.1| 558|Homo sapiens hypothetical protein pr... 30 8.2
BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated prot... 30 8.2
BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated prot... 30 8.2
BC098143-1|AAH98143.1| 214|Homo sapiens VCX3B protein protein. 30 8.2
BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor r... 30 8.2
AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor r... 30 8.2
AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collage... 30 8.2
>U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein.
Length = 1088
Score = 39.5 bits (88), Expect = 0.010
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 337 VTHHMTARPHMEVPPTEVHQVEDPPME-----VQQAEDPPMEVQQAEDPPMEVAIHMEAI 501
V HM P ME TEV Q+ PME V Q E PM+V Q E ME++ ME +
Sbjct: 680 VLAHMELPPPMETAQTEVAQMGPAPMEPAQMEVAQVESAPMQVVQKEPVQMELSPPMEVV 739
Score = 35.9 bits (79), Expect = 0.13
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Frame = +1
Query: 226 PTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVED 405
P Q + + P Q+ + + + + P E M P ME EV QVE
Sbjct: 660 PAQKELLPPVEPAQM-VGAQIVLAHMELPPPMETAQTEVAQMGPAP-MEPAQMEVAQVES 717
Query: 406 PPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 501
PM+V Q E PPMEV Q E +E++ ME +
Sbjct: 718 APMQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVV 755
Score = 33.5 bits (73), Expect = 0.67
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Frame = +1
Query: 349 MTARPHMEVPPTEVHQVE-DPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 501
M P MEV E Q+E PPMEV Q E PP+EV Q E ME++ M +
Sbjct: 730 MELSPPMEVVQKEPVQIELSPPMEVVQKEPVKIELSPPIEVVQKEPVQMELSPPMGVV 787
Score = 29.9 bits (64), Expect = 8.2
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +1
Query: 367 MEVPPTEVHQVE-DPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 501
M+V E Q+E PPMEV Q E PPMEV Q E +E++ +E +
Sbjct: 720 MQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVVQKEPVKIELSPPIEVV 771
>U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein.
Length = 1097
Score = 39.5 bits (88), Expect = 0.010
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 337 VTHHMTARPHMEVPPTEVHQVEDPPME-----VQQAEDPPMEVQQAEDPPMEVAIHMEAI 501
V HM P ME TEV Q+ PME V Q E PM+V Q E ME++ ME +
Sbjct: 681 VLAHMELPPPMETAQTEVAQMGPAPMEPAQMEVAQVESAPMQVVQKEPVQMELSPPMEVV 740
Score = 35.9 bits (79), Expect = 0.13
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Frame = +1
Query: 226 PTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVED 405
P Q + + P Q+ + + + + P E M P ME EV QVE
Sbjct: 661 PAQKELLPPVEPAQM-VGAQIVLAHMELPPPMETAQTEVAQMGPAP-MEPAQMEVAQVES 718
Query: 406 PPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 501
PM+V Q E PPMEV Q E +E++ ME +
Sbjct: 719 APMQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVV 756
Score = 33.5 bits (73), Expect = 0.67
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Frame = +1
Query: 349 MTARPHMEVPPTEVHQVE-DPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 501
M P MEV E Q+E PPMEV Q E PP+EV Q E ME++ M +
Sbjct: 731 MELSPPMEVVQKEPVQIELSPPMEVVQKEPVKIELSPPIEVVQKEPVQMELSPPMGVV 788
Score = 29.9 bits (64), Expect = 8.2
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +1
Query: 367 MEVPPTEVHQVE-DPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 501
M+V E Q+E PPMEV Q E PPMEV Q E +E++ +E +
Sbjct: 721 MQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVVQKEPVKIELSPPIEVV 772
>BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing
transcription factor protein.
Length = 1097
Score = 39.5 bits (88), Expect = 0.010
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 337 VTHHMTARPHMEVPPTEVHQVEDPPME-----VQQAEDPPMEVQQAEDPPMEVAIHMEAI 501
V HM P ME TEV Q+ PME V Q E PM+V Q E ME++ ME +
Sbjct: 681 VLAHMELPPPMETAQTEVAQMGPAPMEPAQMEVAQVESAPMQVVQKEPVQMELSPPMEVV 740
Score = 35.9 bits (79), Expect = 0.13
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Frame = +1
Query: 226 PTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVED 405
P Q + + P Q+ + + + + P E M P ME EV QVE
Sbjct: 661 PAQKELLPPVEPAQM-VGAQIVLAHMELPPPMETAQTEVAQMGPAP-MEPAQMEVAQVES 718
Query: 406 PPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 501
PM+V Q E PPMEV Q E +E++ ME +
Sbjct: 719 APMQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVV 756
Score = 33.5 bits (73), Expect = 0.67
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Frame = +1
Query: 349 MTARPHMEVPPTEVHQVE-DPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 501
M P MEV E Q+E PPMEV Q E PP+EV Q E ME++ M +
Sbjct: 731 MELSPPMEVVQKEPVQIELSPPMEVVQKEPVKIELSPPIEVVQKEPVQMELSPPMGVV 788
Score = 29.9 bits (64), Expect = 8.2
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +1
Query: 367 MEVPPTEVHQVE-DPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 501
M+V E Q+E PPMEV Q E PPMEV Q E +E++ +E +
Sbjct: 721 MQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVVQKEPVKIELSPPIEVV 772
>AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing
transcription factor variant protein.
Length = 1126
Score = 39.5 bits (88), Expect = 0.010
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 337 VTHHMTARPHMEVPPTEVHQVEDPPME-----VQQAEDPPMEVQQAEDPPMEVAIHMEAI 501
V HM P ME TEV Q+ PME V Q E PM+V Q E ME++ ME +
Sbjct: 710 VLAHMELPPPMETAQTEVAQMGPAPMEPAQMEVAQVESAPMQVVQKEPVQMELSPPMEVV 769
Score = 35.9 bits (79), Expect = 0.13
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Frame = +1
Query: 226 PTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVED 405
P Q + + P Q+ + + + + P E M P ME EV QVE
Sbjct: 690 PAQKELLPPVEPAQM-VGAQIVLAHMELPPPMETAQTEVAQMGPAP-MEPAQMEVAQVES 747
Query: 406 PPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 501
PM+V Q E PPMEV Q E +E++ ME +
Sbjct: 748 APMQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVV 785
Score = 33.5 bits (73), Expect = 0.67
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Frame = +1
Query: 349 MTARPHMEVPPTEVHQVE-DPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 501
M P MEV E Q+E PPMEV Q E PP+EV Q E ME++ M +
Sbjct: 760 MELSPPMEVVQKEPVQIELSPPMEVVQKEPVKIELSPPIEVVQKEPVQMELSPPMGVV 817
Score = 29.9 bits (64), Expect = 8.2
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +1
Query: 367 MEVPPTEVHQVE-DPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 501
M+V E Q+E PPMEV Q E PPMEV Q E +E++ +E +
Sbjct: 750 MQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVVQKEPVKIELSPPIEVV 801
>D80003-1|BAA11498.2| 2079|Homo sapiens KIAA0181 protein.
Length = 2079
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 358 RPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 477
RP ++PP + V PP QQ P + QQ PP +
Sbjct: 997 RPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ 1036
>BC126902-1|AAI26903.1| 186|Homo sapiens VCX3A protein protein.
Length = 186
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +1
Query: 220 AEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQV 399
+E TQ P P+++ QL PL+ V ++ +E P ++ QV
Sbjct: 96 SEGTQHDP--PSQESQL---EEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQV 150
Query: 400 EDPPMEVQQAEDPPMEVQQAEDPPME 477
E+P + + E+P + Q E+PP +
Sbjct: 151 EEPLSQESEMEEPLSQESQVEEPPSQ 176
>AL109824-4|CAB92721.2| 2063|Homo sapiens nuclear receptor coactivator
6 protein.
Length = 2063
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 358 RPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 477
RP ++PP + V PP QQ P + QQ PP +
Sbjct: 981 RPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ 1020
>AF245115-1|AAF78480.1| 2063|Homo sapiens nuclear receptor coactivator
protein.
Length = 2063
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 358 RPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 477
RP ++PP + V PP QQ P + QQ PP +
Sbjct: 981 RPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ 1020
>AF208227-1|AAF16403.1| 2001|Homo sapiens transcriptional coactivator
AIB3 protein.
Length = 2001
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 358 RPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 477
RP ++PP + V PP QQ P + QQ PP +
Sbjct: 919 RPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ 958
>AF177388-1|AAF13595.1| 2063|Homo sapiens cancer-amplified
transcriptional coactivator ASC-2 protein.
Length = 2063
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 358 RPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 477
RP ++PP + V PP QQ P + QQ PP +
Sbjct: 981 RPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ 1020
>AF171667-1|AAF71829.1| 2063|Homo sapiens thyroid hormone receptor
binding protein protein.
Length = 2063
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 358 RPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 477
RP ++PP + V PP QQ P + QQ PP +
Sbjct: 981 RPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ 1020
>AF128458-1|AAF37003.1| 2063|Homo sapiens nuclear receptor coactivator
RAP250 protein.
Length = 2063
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 358 RPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 477
RP ++PP + V PP QQ P + QQ PP +
Sbjct: 981 RPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ 1020
>AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein.
Length = 198
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 376 PPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 477
P E DPP E Q +PP E Q DPP E
Sbjct: 17 PQPEPQPPLDPPQEPQPPLEPPQEPQPPLDPPQE 50
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 376 PPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPP 471
PP + Q PP+E Q PP++ Q PP
Sbjct: 23 PPLDPPQEPQPPLEPPQEPQPPLDPPQEHSPP 54
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 361 PHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPP 471
P PP E Q PP++ Q PP + ++ PP
Sbjct: 28 PQEPQPPLEPPQEPQPPLDPPQEHSPPCSLHRSHSPP 64
>Z74477-2|CAI41996.1| 352|Homo sapiens testis expressed 13A
protein.
Length = 352
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +2
Query: 368 WRFPLRRFIRWRIPLWRFNRRRIPLWRFN----RRRIPLWR*QSIWRQS 502
WR L + W +PLWR +P WR + R +P WR Q WR+S
Sbjct: 201 WRLWLPLWRPW-LPLWRLG---LPPWRPSSPTWRPGLPPWRPQRSWRES 245
>X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein.
Length = 1586
Score = 31.1 bits (67), Expect = 3.6
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Frame = +1
Query: 178 PTCKKKSLVEGSHAA--EPTQ-PKPMAPNRKHQLLISTRPLTTNPRFRPATEFL-LAVTH 345
P + +L+ G A +P + P P +P + HQL R +P E L LAV
Sbjct: 149 PPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQG 208
Query: 346 HMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPM-EVQQAEDPPM 474
T + + Q + + QQ + PP + QQ + P +
Sbjct: 209 KRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPPQPQTQQQQQPAL 252
>BC105110-1|AAI05111.1| 560|Homo sapiens MST101 protein protein.
Length = 560
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/92 (23%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Frame = +1
Query: 205 EGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPH--MEVP 378
+G +A P+ P ++ P P + + V A P E+P
Sbjct: 55 DGQQSAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPELP 114
Query: 379 PTEVHQVEDPPMEVQQAEDP-PMEVQQAEDPP 471
P+ E PP ++ E P P V A PP
Sbjct: 115 PSPASPPEQPPAPEEREEPPLPQPVAPALVPP 146
>BC035076-1|AAH35076.2| 571|Homo sapiens MST101 protein protein.
Length = 571
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/92 (23%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Frame = +1
Query: 205 EGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPH--MEVP 378
+G +A P+ P ++ P P + + V A P E+P
Sbjct: 66 DGQQSAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPELP 125
Query: 379 PTEVHQVEDPPMEVQQAEDP-PMEVQQAEDPP 471
P+ E PP ++ E P P V A PP
Sbjct: 126 PSPASPPEQPPAPEEREEPPLPQPVAPALVPP 157
>AF167081-1|AAG41767.1| 206|Homo sapiens variably charged X-B1
protein.
Length = 206
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 337 VTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 477
V ++ +E P ++ QVE+P + + E+P + Q E+PP +
Sbjct: 150 VEEPLSQESEVEEPLSQESQVEEPLSQESEMEEPLSQESQVEEPPSQ 196
>AF159129-1|AAF28174.1| 206|Homo sapiens variable charge protein on
X with ten repeats protein.
Length = 206
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 337 VTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 477
V ++ +E P ++ QVE+P + + E+P + Q E+PP +
Sbjct: 150 VEEPLSQESEVEEPLSQESQVEEPLSQESEMEEPLSQESQVEEPPSQ 196
>AB067522-1|BAB67828.1| 441|Homo sapiens KIAA1935 protein protein.
Length = 441
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/92 (23%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Frame = +1
Query: 205 EGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPH--MEVP 378
+G +A P+ P ++ P P + + V A P E+P
Sbjct: 61 DGQQSAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPELP 120
Query: 379 PTEVHQVEDPPMEVQQAEDP-PMEVQQAEDPP 471
P+ E PP ++ E P P V A PP
Sbjct: 121 PSPASPPEQPPAPEEREEPPLPQPVAPALVPP 152
>BC038449-1|AAH38449.1| 1139|Homo sapiens MGA protein protein.
Length = 1139
Score = 30.3 bits (65), Expect = 6.2
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -2
Query: 220 LHAILRQGTSSCM*DMCR-SCLCGQTCTDLRQARRLRC*GILYLCT 86
+H I+R+ C D CR C+C + RQ R ++ CT
Sbjct: 1036 IHTIIRKRAPPCNNDFCRLGCVCSSLALEKRQPAHCRRPDCMFGCT 1081
>AK025751-1|BAB15232.1| 674|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22098 fis, clone HEP17040. ).
Length = 674
Score = 30.3 bits (65), Expect = 6.2
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -2
Query: 220 LHAILRQGTSSCM*DMCR-SCLCGQTCTDLRQARRLRC*GILYLCT 86
+H I+R+ C D CR C+C + RQ R ++ CT
Sbjct: 447 IHTIIRKRAPPCNNDFCRLGCVCSSLALEKRQPAHCRRPDCMFGCT 492
>AK022696-1|BAB14186.1| 938|Homo sapiens protein ( Homo sapiens
cDNA FLJ12634 fis, clone NT2RM4001858, weakly similar to
T-BOX CONTAINING PROTEIN TBX6L. ).
Length = 938
Score = 30.3 bits (65), Expect = 6.2
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -2
Query: 220 LHAILRQGTSSCM*DMCR-SCLCGQTCTDLRQARRLRC*GILYLCT 86
+H I+R+ C D CR C+C + RQ R ++ CT
Sbjct: 840 IHTIIRKRAPPCNNDFCRLGCVCSSLALEKRQPAHCRRPDCMFGCT 885
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 343 HHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPMEVAIHMEA 498
HH M+ P V Q PP + PP + QQ PP ++ +A
Sbjct: 738 HHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQA 789
>X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor
receptor type 1 protein.
Length = 455
Score = 29.9 bits (64), Expect = 8.2
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +1
Query: 193 KSLVEGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHME 372
KS E E T KP+APN P T P++ F + T+ P+
Sbjct: 250 KSTPEKEGELEGTTTKPLAPNPSFSPTPGFTP-TLGFSPVPSSTFTSSSTYTPGDCPNFA 308
Query: 373 VPPTEV---HQVEDPPMEVQQAEDP-PMEVQQAED 465
P EV +Q DP + A DP P +Q+ ED
Sbjct: 309 APRREVAPPYQGADPILATALASDPIPNPLQKWED 343
>M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor
receptor 1 protein.
Length = 455
Score = 29.9 bits (64), Expect = 8.2
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +1
Query: 193 KSLVEGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHME 372
KS E E T KP+APN P T P++ F + T+ P+
Sbjct: 250 KSTPEKEGELEGTTTKPLAPNPSFSPTPGFTP-TLGFSPVPSSTFTSSSTYTPGDCPNFA 308
Query: 373 VPPTEV---HQVEDPPMEVQQAEDP-PMEVQQAED 465
P EV +Q DP + A DP P +Q+ ED
Sbjct: 309 APRREVAPPYQGADPILATALASDPIPNPLQKWED 343
>M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 29.9 bits (64), Expect = 8.2
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +1
Query: 193 KSLVEGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHME 372
KS E E T KP+APN P T P++ F + T+ P+
Sbjct: 250 KSTPEKEGELEGTTTKPLAPNPSFSPTPGFTP-TLGFSPVPSSTFTSSSTYTPGDCPNFA 308
Query: 373 VPPTEV---HQVEDPPMEVQQAEDP-PMEVQQAED 465
P EV +Q DP + A DP P +Q+ ED
Sbjct: 309 APRREVAPPYQGADPILATALASDPIPNPLQKWED 343
>M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein.
Length = 453
Score = 29.9 bits (64), Expect = 8.2
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +1
Query: 193 KSLVEGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHME 372
KS E E T KP+APN P T P++ F + T+ P+
Sbjct: 250 KSTPEKEGELEGTTTKPLAPNPSFSPTPGFTP-TLGFSPVPSSTFTSSSTYTPGDCPNFA 308
Query: 373 VPPTEV---HQVEDPPMEVQQAEDP-PMEVQQAED 465
P EV +Q DP + A DP P +Q+ ED
Sbjct: 309 APRREVAPPYQGADPILATALASDPIPNPLQKWED 343
>M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 29.9 bits (64), Expect = 8.2
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +1
Query: 193 KSLVEGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHME 372
KS E E T KP+APN P T P++ F + T+ P+
Sbjct: 250 KSTPEKEGELEGTTTKPLAPNPSFSPTPGFTP-TLGFSPVPSSTFTSSSTYTPGDCPNFA 308
Query: 373 VPPTEV---HQVEDPPMEVQQAEDP-PMEVQQAED 465
P EV +Q DP + A DP P +Q+ ED
Sbjct: 309 APRREVAPPYQGADPILATALASDPIPNPLQKWED 343
>M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor
necrosis factor receptor mRNA, complete cds. ).
Length = 455
Score = 29.9 bits (64), Expect = 8.2
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +1
Query: 193 KSLVEGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHME 372
KS E E T KP+APN P T P++ F + T+ P+
Sbjct: 250 KSTPEKEGELEGTTTKPLAPNPSFSPTPGFTP-TLGFSPVPSSTFTSSSTYTPGDCPNFA 308
Query: 373 VPPTEV---HQVEDPPMEVQQAEDP-PMEVQQAED 465
P EV +Q DP + A DP P +Q+ ED
Sbjct: 309 APRREVAPPYQGADPILATALASDPIPNPLQKWED 343
>BX641155-1|CAE46068.1| 558|Homo sapiens hypothetical protein
protein.
Length = 558
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 217 AAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHMEVP 378
AA+P KP P + +T+P TT P + + E + +A+ H E P
Sbjct: 340 AAKPVATKPEVPRPQAAKPAATKPATTKPMVKMSREVQVFEITENSAKLHWERP 393
>BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 88 CRDIGCLNSEVC-VLAE-DPCTFGHTSNCGTYPTCKKKSLVEGSHAAEPTQPKPMAP 252
C + C++S C V E PC G TS+C T C++ S A+ P Q P
Sbjct: 57 CTPVSCVSSPCCPVTCEPSPCQSGCTSSC-TPSCCQQSSCQLACCASSPCQQACCVP 112
>BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 88 CRDIGCLNSEVC-VLAE-DPCTFGHTSNCGTYPTCKKKSLVEGSHAAEPTQPKPMAP 252
C + C++S C V E PC G TS+C T C++ S A+ P Q P
Sbjct: 57 CTPVSCVSSPCCPVTCEPSPCQSGCTSSC-TPSCCQQSSCQLACCASSPCQQACCVP 112
>BC098143-1|AAH98143.1| 214|Homo sapiens VCX3B protein protein.
Length = 214
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 337 VTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDP 468
V ++ ME P ++ QVE+P + + E+P + Q E+P
Sbjct: 108 VEEPLSQESEMEEPLSQESQVEEPLSQESEVEEPLSQESQVEEP 151
>BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 29.9 bits (64), Expect = 8.2
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +1
Query: 193 KSLVEGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHME 372
KS E E T KP+APN P T P++ F + T+ P+
Sbjct: 250 KSTPEKEGELEGTTTKPLAPNPSFSPTPGFTP-TLGFSPVPSSTFTSSSTYTPGDCPNFA 308
Query: 373 VPPTEV---HQVEDPPMEVQQAEDP-PMEVQQAED 465
P EV +Q DP + A DP P +Q+ ED
Sbjct: 309 APRREVAPPYQGADPILATALASDPIPNPLQKWED 343
>AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 29.9 bits (64), Expect = 8.2
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +1
Query: 193 KSLVEGSHAAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHME 372
KS E E T KP+APN P T P++ F + T+ P+
Sbjct: 250 KSTPEKEGELEGTTTKPLAPNPSFSPTPGFTP-TLGFSPVPSSTFTSSSTYTPGDCPNFA 308
Query: 373 VPPTEV---HQVEDPPMEVQQAEDP-PMEVQQAED 465
P EV +Q DP + A DP P +Q+ ED
Sbjct: 309 APRREVAPPYQGADPILATALASDPIPNPLQKWED 343
>AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collagen
isoform 5 precursor variant protein.
Length = 1702
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 217 AAEPTQPKPMAPNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHMEVP 378
AA+P KP P + +T+P TT P + + E + +A+ H E P
Sbjct: 1484 AAKPVATKPEVPRPQAAKPAATKPATTKPMVKMSREVQVFEITENSAKLHWERP 1537
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,317,713
Number of Sequences: 237096
Number of extensions: 1779499
Number of successful extensions: 7324
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 6306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7163
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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