Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1098
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   0.83 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.83 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.3  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    22   5.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   5.8  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.7  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 449 PDNKPFGYPFDR 484
           PD +  GYPFDR
Sbjct: 635 PDRRSMGYPFDR 646


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 449 PDNKPFGYPFDR 484
           PD +  GYPFDR
Sbjct: 634 PDRRSMGYPFDR 645


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -1

Query: 261 RSELGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKAHN 121
           RS+LGS  +   + +A    +D++      +F++L    R  FKA N
Sbjct: 166 RSKLGSIWHSVKKTVAGDKVLDENAAEHREQFVSLVRELRGAFKAEN 212


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 285 AHLQKLQPRSELGSTTN 235
           A LQ++ P+S  G+TTN
Sbjct: 50  ALLQEIIPKSYFGTTTN 66


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 285 AHLQKLQPRSELGSTTN 235
           A LQ++ P+S  G+TTN
Sbjct: 50  ALLQEIIPKSYFGTTTN 66


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +2

Query: 77  LQVDVLIF-KYWLYLVLWA 130
           LQV  + F  YWLYLVL A
Sbjct: 49  LQVLFVSFVSYWLYLVLEA 67


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +2

Query: 77  LQVDVLIF-KYWLYLVLWA 130
           LQV  + F  YWLYLVL A
Sbjct: 67  LQVLFVSFVSYWLYLVLEA 85


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 331 YFLTISCPLPTHSL*QYSMVFRL 399
           Y  TI+ PL    L  Y+M FR+
Sbjct: 323 YDSTITAPLSNPPLWPYTMYFRM 345


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,590
Number of Sequences: 336
Number of extensions: 3496
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)