BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1098
(726 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-2321|AAF53275.1| 1413|Drosophila melanogaster CG6108-PA... 33 0.30
AY069748-1|AAL39893.1| 772|Drosophila melanogaster LP08717p pro... 29 4.9
AE014296-2|AAF47324.1| 772|Drosophila melanogaster CG6821-PA pr... 29 4.9
AE014298-1773|AAF48168.2| 816|Drosophila melanogaster CG2559-PA... 29 6.4
X97770-1|CAA66371.1| 718|Drosophila melanogaster larval serum p... 29 8.5
X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein ... 29 8.5
U63556-1|AAB58821.1| 789|Drosophila melanogaster larval serum p... 29 8.5
BT024223-1|ABC86285.1| 789|Drosophila melanogaster LP18812p pro... 29 8.5
AY119005-1|AAM50865.1| 701|Drosophila melanogaster LP03332p pro... 29 8.5
AY069163-1|AAL39308.1| 789|Drosophila melanogaster GH19329p pro... 29 8.5
AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p pro... 29 8.5
AJ251803-1|CAB64653.1| 1449|Drosophila melanogaster GRAAL protei... 29 8.5
AE014296-2095|AAF49958.1| 701|Drosophila melanogaster CG6806-PA... 29 8.5
AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB... 29 8.5
AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD... 29 8.5
AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA... 29 8.5
AE014134-182|AAF51434.1| 789|Drosophila melanogaster CG4178-PA ... 29 8.5
AE013599-3155|AAF46693.1| 2515|Drosophila melanogaster CG9450-PA... 29 8.5
>AE014134-2321|AAF53275.1| 1413|Drosophila melanogaster CG6108-PA
protein.
Length = 1413
Score = 33.5 bits (73), Expect = 0.30
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Frame = +2
Query: 383 PWCFVYPYEPTPKE---SEPFKSVVPDN-------KPFGYPFDRPVLPQYFKNLTCSSRR 532
P+ + YPY P P +P ++ +P P+G+P+ PV P Y ++ T SR
Sbjct: 39 PYPYYYPYYPPPLPPYGQQPGEAQIPPGYPQFHAMPPYGHPYPYPVAPSYSQSSTEESRA 98
Query: 533 S 535
S
Sbjct: 99 S 99
>AY069748-1|AAL39893.1| 772|Drosophila melanogaster LP08717p
protein.
Length = 772
Score = 29.5 bits (63), Expect = 4.9
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 452 DNKPFGYPFDRPV 490
D KPFGYPFDR +
Sbjct: 717 DTKPFGYPFDRQI 729
>AE014296-2|AAF47324.1| 772|Drosophila melanogaster CG6821-PA
protein.
Length = 772
Score = 29.5 bits (63), Expect = 4.9
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 452 DNKPFGYPFDRPV 490
D KPFGYPFDR +
Sbjct: 717 DTKPFGYPFDRQI 729
>AE014298-1773|AAF48168.2| 816|Drosophila melanogaster CG2559-PA
protein.
Length = 816
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 511 PNMFFKKVLVYHEGELFPYLFNIPHYT 591
PNM+FK V +YH + Y +N YT
Sbjct: 771 PNMYFKDVTIYHADTMEKY-YNYKEYT 796
>X97770-1|CAA66371.1| 718|Drosophila melanogaster larval serum
protein 2 protein.
Length = 718
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 404 YEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYF 505
Y+P S D PFG+PF+RPV Y+
Sbjct: 645 YDPVVSCGVGHGSRYVDALPFGFPFNRPVKHDYY 678
>X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein
protein.
Length = 2515
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 416 VSVHTDRRNTMEYCYKLWVGNGQDIVKKY 330
+ V D++ M++C KLW N Q V +Y
Sbjct: 203 IGVSVDKQLMMDHCKKLWKDNPQSPVTEY 231
>U63556-1|AAB58821.1| 789|Drosophila melanogaster larval serum
protein 1 beta subunitprotein.
Length = 789
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 511 PNMFFKKVLVYHEGELFPY 567
PNM+FK V +YH + PY
Sbjct: 744 PNMYFKDVSIYHADTMEPY 762
>BT024223-1|ABC86285.1| 789|Drosophila melanogaster LP18812p
protein.
Length = 789
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 511 PNMFFKKVLVYHEGELFPY 567
PNM+FK V +YH + PY
Sbjct: 744 PNMYFKDVSIYHADTMEPY 762
>AY119005-1|AAM50865.1| 701|Drosophila melanogaster LP03332p
protein.
Length = 701
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 404 YEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYF 505
Y+P S D PFG+PF+RPV Y+
Sbjct: 645 YDPVVSCGVGHGSRYVDALPFGFPFNRPVKHDYY 678
>AY069163-1|AAL39308.1| 789|Drosophila melanogaster GH19329p
protein.
Length = 789
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 511 PNMFFKKVLVYHEGELFPY 567
PNM+FK V +YH + PY
Sbjct: 744 PNMYFKDVSIYHADTMEPY 762
>AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p protein.
Length = 2409
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 401 PYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKN 511
P+ P KE + S+ P KP +D +PQY N
Sbjct: 1325 PHSPGAKEPQSQDSL-PGQKPINLDYDEEPIPQYLHN 1360
>AJ251803-1|CAB64653.1| 1449|Drosophila melanogaster GRAAL protein
protein.
Length = 1449
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 401 PYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKN 511
P+ P KE + S+ P KP +D +PQY N
Sbjct: 365 PHSPGAKEPQSQDSL-PGQKPINLDYDEEPIPQYLHN 400
>AE014296-2095|AAF49958.1| 701|Drosophila melanogaster CG6806-PA
protein.
Length = 701
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 404 YEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYF 505
Y+P S D PFG+PF+RPV Y+
Sbjct: 645 YDPVVSCGVGHGSRYVDALPFGFPFNRPVKHDYY 678
>AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB,
isoform B protein.
Length = 1374
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 401 PYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKN 511
P+ P KE + S+ P KP +D +PQY N
Sbjct: 289 PHSPGAKEPQSQDSL-PGQKPINLDYDEEPIPQYLHN 324
>AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD,
isoform D protein.
Length = 1450
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 401 PYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKN 511
P+ P KE + S+ P KP +D +PQY N
Sbjct: 365 PHSPGAKEPQSQDSL-PGQKPINLDYDEEPIPQYLHN 400
>AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA,
isoform A protein.
Length = 2786
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 401 PYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKN 511
P+ P KE + S+ P KP +D +PQY N
Sbjct: 1701 PHSPGAKEPQSQDSL-PGQKPINLDYDEEPIPQYLHN 1736
>AE014134-182|AAF51434.1| 789|Drosophila melanogaster CG4178-PA
protein.
Length = 789
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 511 PNMFFKKVLVYHEGELFPY 567
PNM+FK V +YH + PY
Sbjct: 744 PNMYFKDVSIYHADTMEPY 762
>AE013599-3155|AAF46693.1| 2515|Drosophila melanogaster CG9450-PA
protein.
Length = 2515
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 416 VSVHTDRRNTMEYCYKLWVGNGQDIVKKY 330
+ V D++ M++C KLW N Q V +Y
Sbjct: 203 IGVSVDKQLMMDHCKKLWKDNPQSPVTEY 231
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,260,115
Number of Sequences: 53049
Number of extensions: 627003
Number of successful extensions: 1788
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1787
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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