Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1094
         (775 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK000003-1|BAA92228.1|  235|Homo sapiens FLJ00003 protein protein.     31   4.6  
BC042145-1|AAH42145.1|  837|Homo sapiens zinc fingers and homeob...    30   8.0  
AL133561-1|CAB63715.1|  580|Homo sapiens hypothetical protein pr...    30   8.0  
AB083653-1|BAC76615.1|  837|Homo sapiens transcription factor ZH...    30   8.0  
AB020661-1|BAA74877.2|  868|Homo sapiens KIAA0854 protein protein.     30   8.0  

>AK000003-1|BAA92228.1|  235|Homo sapiens FLJ00003 protein protein.
          Length = 235

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 25/81 (30%), Positives = 33/81 (40%)
 Frame = -2

Query: 582 SNSPPGSVLEPDHAGVLNGDERFRQSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVV 403
           S+  PGS  +P HA V     R    P    G     P +++ R    P+  S  T    
Sbjct: 50  SSHTPGS-RQPGHASVPTARARTLSPPQHRCGFACLGPREVVGRTSGHPSMQS--TPGFT 106

Query: 402 VFQRRSRETISHLCYTSHVSL 340
               R RET S LC+  H +L
Sbjct: 107 FGNLRVRETSSRLCHKLHQNL 127


>BC042145-1|AAH42145.1|  837|Homo sapiens zinc fingers and
           homeoboxes 2 protein.
          Length = 837

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 24/87 (27%), Positives = 38/87 (43%)
 Frame = -2

Query: 624 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFRQSPLCTLGTKHRAPADIIDRAP 445
           LG     LT V   S +   S +    AGV N  ++    PL T           I + P
Sbjct: 371 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK---RPLVTPQAAPEPKRPHIAQVP 427

Query: 444 LPPNRVSNETMKVVVFQRRSRETISHL 364
            PP +V+N  +     +++++E I+HL
Sbjct: 428 EPPPKVANPPLTPASDRKKTKEQIAHL 454


>AL133561-1|CAB63715.1|  580|Homo sapiens hypothetical protein
           protein.
          Length = 580

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -3

Query: 380 KRSPTYATPLMSPYNARLESSSTGSSFPADSFSVARVRPRT-SRASQTCYCSISCGSKTP 204
           + SPT   P  SP      +S TGS   A   +  R  PRT  RAS T   S +  ++TP
Sbjct: 243 RASPTRMPPRASPTRRPPRASPTGSPPRASPMTPPRASPRTPPRASPTTTPSRASLTRTP 302


>AB083653-1|BAC76615.1|  837|Homo sapiens transcription factor ZHX2
           protein.
          Length = 837

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 24/87 (27%), Positives = 38/87 (43%)
 Frame = -2

Query: 624 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFRQSPLCTLGTKHRAPADIIDRAP 445
           LG     LT V   S +   S +    AGV N  ++    PL T           I + P
Sbjct: 371 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK---RPLVTPQAAPEPKRPHIAQVP 427

Query: 444 LPPNRVSNETMKVVVFQRRSRETISHL 364
            PP +V+N  +     +++++E I+HL
Sbjct: 428 EPPPKVANPPLTPASDRKKTKEQIAHL 454


>AB020661-1|BAA74877.2|  868|Homo sapiens KIAA0854 protein protein.
          Length = 868

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 24/87 (27%), Positives = 38/87 (43%)
 Frame = -2

Query: 624 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFRQSPLCTLGTKHRAPADIIDRAP 445
           LG     LT V   S +   S +    AGV N  ++    PL T           I + P
Sbjct: 402 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK---RPLVTPQAAPEPKRPHIAQVP 458

Query: 444 LPPNRVSNETMKVVVFQRRSRETISHL 364
            PP +V+N  +     +++++E I+HL
Sbjct: 459 EPPPKVANPPLTPASDRKKTKEQIAHL 485


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,040,137
Number of Sequences: 237096
Number of extensions: 2609585
Number of successful extensions: 6499
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6494
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)