Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1094
(775 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069812-1|AAL39957.1| 937|Drosophila melanogaster SD05477p pro... 33 0.58
AE014298-1945|AAN09334.1| 937|Drosophila melanogaster CG32627-P... 33 0.58
AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-P... 33 0.58
BT016032-1|AAV36917.1| 798|Drosophila melanogaster RE04643p pro... 31 1.3
AE014296-2988|AAF49283.1| 798|Drosophila melanogaster CG5290-PA... 31 1.3
AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein ... 31 2.3
AE014298-2120|AAF48437.1| 984|Drosophila melanogaster CG5877-PA... 31 2.3
U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensit... 29 7.1
AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p pro... 29 7.1
AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA... 29 7.1
>AY069812-1|AAL39957.1| 937|Drosophila melanogaster SD05477p
protein.
Length = 937
Score = 32.7 bits (71), Expect = 0.58
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = -2
Query: 714 FAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGV 535
FA+P ++ D + P P E V+ E + H+ Y + VP N+P G+ L+P G
Sbjct: 181 FALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRPVGE 237
Query: 534 LNGDERFRQSPL 499
NG F SP+
Sbjct: 238 ENGIVVFSYSPI 249
>AE014298-1945|AAN09334.1| 937|Drosophila melanogaster CG32627-PB,
isoform B protein.
Length = 937
Score = 32.7 bits (71), Expect = 0.58
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = -2
Query: 714 FAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGV 535
FA+P ++ D + P P E V+ E + H+ Y + VP N+P G+ L+P G
Sbjct: 181 FALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRPVGE 237
Query: 534 LNGDERFRQSPL 499
NG F SP+
Sbjct: 238 ENGIVVFSYSPI 249
>AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-PA,
isoform A protein.
Length = 1201
Score = 32.7 bits (71), Expect = 0.58
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = -2
Query: 714 FAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGV 535
FA+P ++ D + P P E V+ E + H+ Y + VP N+P G+ L+P G
Sbjct: 181 FALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRPVGE 237
Query: 534 LNGDERFRQSPL 499
NG F SP+
Sbjct: 238 ENGIVVFSYSPI 249
>BT016032-1|AAV36917.1| 798|Drosophila melanogaster RE04643p
protein.
Length = 798
Score = 31.5 bits (68), Expect = 1.3
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Frame = -2
Query: 690 HLDQASFCPFAPREVS--VLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHA--GVLNGD 523
HL QA F F RE+ +L ELA G+L++ +++ Q L+ + G+L
Sbjct: 179 HL-QAHFNQFESRELQSLLLLELANGYLQFHRSEIASQILDELCKHLQVELKVEGLLGVR 237
Query: 522 ERFRQSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKV 406
+F+Q L L K + ++ PLPP +NET K+
Sbjct: 238 TKFQQKALPQLCLKVE---HLNEQQPLPPAVQTNETTKL 273
>AE014296-2988|AAF49283.1| 798|Drosophila melanogaster CG5290-PA
protein.
Length = 798
Score = 31.5 bits (68), Expect = 1.3
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Frame = -2
Query: 690 HLDQASFCPFAPREVS--VLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHA--GVLNGD 523
HL QA F F RE+ +L ELA G+L++ +++ Q L+ + G+L
Sbjct: 179 HL-QAHFNQFESRELQSLLLLELANGYLQFHRSEIASQILDELCKHLQVELKVEGLLGVR 237
Query: 522 ERFRQSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKV 406
+F+Q L L K + ++ PLPP +NET K+
Sbjct: 238 TKFQQKALPQLCLKVE---HLNEQQPLPPAVQTNETTKL 273
>AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein
protein.
Length = 1571
Score = 30.7 bits (66), Expect = 2.3
Identities = 35/133 (26%), Positives = 53/133 (39%)
Frame = -2
Query: 708 VPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLN 529
V + L+Q F VS ++L LG + + P S S + L P+ A L
Sbjct: 538 VQAQVSGLNQTVAAQFKNAAVSP-SDLRLGRVAVGDDGLCPPSTSRKSAFL-PNSAKFLR 595
Query: 528 GDERFRQSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLCYTSH 349
F PL AP D++ R+P P + + + + +ETI T
Sbjct: 596 DLPDF---PLADPKFYESAPIDVLIRSPHPASVLLSGAKTNICGSLLGQETIFRWVLTGP 652
Query: 348 VSLQCQTRVKLNR 310
VS Q+R+ L R
Sbjct: 653 VSASAQSRIPLFR 665
>AE014298-2120|AAF48437.1| 984|Drosophila melanogaster CG5877-PA,
isoform A protein.
Length = 984
Score = 30.7 bits (66), Expect = 2.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 84 DKSLHQLRTAMHHHPPNQE 28
++ +H L TAM HHP NQ+
Sbjct: 211 EQQIHSLETAMEHHPSNQQ 229
>U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensitive
serotonin transporterprotein.
Length = 622
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 480 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 376
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p
protein.
Length = 622
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 480 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 376
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA
protein.
Length = 622
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 480 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 376
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,770,405
Number of Sequences: 53049
Number of extensions: 778142
Number of successful extensions: 2466
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2465
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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