Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1092
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.59 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   7.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   7.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   7.2  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   9.5  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   9.5  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   9.5  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   9.5  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 390  NDEAGDLMTVPSGPILVSRTGA 325
            ND+  D +T P  P+ +SR G+
Sbjct: 1387 NDDGSDRLTSPPTPLSISRAGS 1408


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 204 CNDSPAEATSPENGW 160
           C D P E   PE+GW
Sbjct: 642 CRDIPEEFLRPESGW 656


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 565 LSPLYPVPTID 597
           LSP+YP P +D
Sbjct: 71  LSPIYPSPMVD 81


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 5   ICTDGGSKRAHAQTLLRSPSRTSYSLRLNDTKLKI*HH 118
           +C    S+       L SP R   + R+N TKLK  HH
Sbjct: 120 LCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKR-HH 156


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 565 LSPLYPVPTID 597
           LSP+YP P +D
Sbjct: 71  LSPIYPSPMVD 81


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 145 AYTLPLPARVMLNF 104
           ++ +PLP RV+ NF
Sbjct: 222 SFCIPLPVRVLPNF 235


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 573 PIPSSDDRFARQNRYGPPSGFP 638
           P  S  ++  R    GPP+ FP
Sbjct: 364 PFVSIQEQIPRLRYIGPPTSFP 385


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = -2

Query: 71  TCATESAEGSGREPAWSLRRC 9
           TC  E     G E AW   +C
Sbjct: 114 TCKKEVTSTEGCEVAWQFGKC 134


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = -2

Query: 71  TCATESAEGSGREPAWSLRRC 9
           TC  E     G E AW   +C
Sbjct: 88  TCKKEVTSTEGCEVAWQFGKC 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,631
Number of Sequences: 438
Number of extensions: 5238
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)