Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1089
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042145-1|AAH42145.1| 837|Homo sapiens zinc fingers and homeob... 31 4.8
AB083653-1|BAC76615.1| 837|Homo sapiens transcription factor ZH... 31 4.8
AB020661-1|BAA74877.2| 868|Homo sapiens KIAA0854 protein protein. 31 4.8
X04701-1|CAA28407.1| 705|Homo sapiens protein ( Human mRNA for ... 31 6.4
M14058-1|AAA51851.1| 705|Homo sapiens C1R protein. 31 6.4
BC127003-1|AAI27004.1| 868|Homo sapiens zinc finger protein 28 ... 31 6.4
BC127002-1|AAI27003.1| 868|Homo sapiens zinc finger protein 28 ... 31 6.4
BC099903-1|AAH99903.1| 349|Homo sapiens ZFP28 protein protein. 31 6.4
BC035220-1|AAH35220.1| 705|Homo sapiens complement component 1,... 31 6.4
BC028416-1|AAH28416.1| 349|Homo sapiens ZFP28 protein protein. 31 6.4
AF507045-1|AAM28892.1| 868|Homo sapiens zinc finger protein 28 ... 31 6.4
AB083037-1|BAC19850.2| 705|Homo sapiens r subcomponent of compl... 31 6.4
AB037852-1|BAA92669.1| 891|Homo sapiens KIAA1431 protein protein. 31 6.4
>BC042145-1|AAH42145.1| 837|Homo sapiens zinc fingers and
homeoboxes 2 protein.
Length = 837
Score = 31.1 bits (67), Expect = 4.8
Identities = 25/87 (28%), Positives = 42/87 (48%)
Frame = -2
Query: 649 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFRHVTTLHAWNKHRAPADIIDRAP 470
LG LT V S + S + AGV N ++ R + T A + + P I + P
Sbjct: 371 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK-RPLVTPQAAPEPKRPH--IAQVP 427
Query: 469 LPPNRVSNETMKVVVFQRRSRETISHL 389
PP +V+N + +++++E I+HL
Sbjct: 428 EPPPKVANPPLTPASDRKKTKEQIAHL 454
>AB083653-1|BAC76615.1| 837|Homo sapiens transcription factor ZHX2
protein.
Length = 837
Score = 31.1 bits (67), Expect = 4.8
Identities = 25/87 (28%), Positives = 42/87 (48%)
Frame = -2
Query: 649 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFRHVTTLHAWNKHRAPADIIDRAP 470
LG LT V S + S + AGV N ++ R + T A + + P I + P
Sbjct: 371 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK-RPLVTPQAAPEPKRPH--IAQVP 427
Query: 469 LPPNRVSNETMKVVVFQRRSRETISHL 389
PP +V+N + +++++E I+HL
Sbjct: 428 EPPPKVANPPLTPASDRKKTKEQIAHL 454
>AB020661-1|BAA74877.2| 868|Homo sapiens KIAA0854 protein protein.
Length = 868
Score = 31.1 bits (67), Expect = 4.8
Identities = 25/87 (28%), Positives = 42/87 (48%)
Frame = -2
Query: 649 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFRHVTTLHAWNKHRAPADIIDRAP 470
LG LT V S + S + AGV N ++ R + T A + + P I + P
Sbjct: 402 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK-RPLVTPQAAPEPKRPH--IAQVP 458
Query: 469 LPPNRVSNETMKVVVFQRRSRETISHL 389
PP +V+N + +++++E I+HL
Sbjct: 459 EPPPKVANPPLTPASDRKKTKEQIAHL 485
>X04701-1|CAA28407.1| 705|Homo sapiens protein ( Human mRNA for
complement component C1r. ).
Length = 705
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 260 HCPYLLSSETTAKGTGLGESAGKEDPVELDSS 355
HCPY + A G +GE GK+ P +LD+S
Sbjct: 249 HCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>M14058-1|AAA51851.1| 705|Homo sapiens C1R protein.
Length = 705
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 260 HCPYLLSSETTAKGTGLGESAGKEDPVELDSS 355
HCPY + A G +GE GK+ P +LD+S
Sbjct: 249 HCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>BC127003-1|AAI27004.1| 868|Homo sapiens zinc finger protein 28
homolog (mouse) protein.
Length = 868
Score = 30.7 bits (66), Expect = 6.4
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 396 PTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWEFVNPFMR 235
P+ T L N +LE+ TG A S V V++D +WE++NP R
Sbjct: 72 PSRDTALPQERNKKLEAVGTGIEPKAMSQGLVTFGDVAVDFSQEEWEWLNPIQR 125
>BC127002-1|AAI27003.1| 868|Homo sapiens zinc finger protein 28
homolog (mouse) protein.
Length = 868
Score = 30.7 bits (66), Expect = 6.4
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 396 PTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWEFVNPFMR 235
P+ T L N +LE+ TG A S V V++D +WE++NP R
Sbjct: 72 PSRDTALPQERNKKLEAVGTGIEPKAMSQGLVTFGDVAVDFSQEEWEWLNPIQR 125
>BC099903-1|AAH99903.1| 349|Homo sapiens ZFP28 protein protein.
Length = 349
Score = 30.7 bits (66), Expect = 6.4
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 396 PTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWEFVNPFMR 235
P+ T L N +LE+ TG A S V V++D +WE++NP R
Sbjct: 72 PSRDTALPQERNKKLEAVGTGIEPKAMSQGLVTFGDVAVDFSQEEWEWLNPIQR 125
>BC035220-1|AAH35220.1| 705|Homo sapiens complement component 1, r
subcomponent protein.
Length = 705
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 260 HCPYLLSSETTAKGTGLGESAGKEDPVELDSS 355
HCPY + A G +GE GK+ P +LD+S
Sbjct: 249 HCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>BC028416-1|AAH28416.1| 349|Homo sapiens ZFP28 protein protein.
Length = 349
Score = 30.7 bits (66), Expect = 6.4
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 396 PTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWEFVNPFMR 235
P+ T L N +LE+ TG A S V V++D +WE++NP R
Sbjct: 72 PSRDTALPQERNKKLEAVGTGIEPKAMSQGLVTFGDVAVDFSQEEWEWLNPIQR 125
>AF507045-1|AAM28892.1| 868|Homo sapiens zinc finger protein 28
protein.
Length = 868
Score = 30.7 bits (66), Expect = 6.4
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 396 PTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWEFVNPFMR 235
P+ T L N +LE+ TG A S V V++D +WE++NP R
Sbjct: 72 PSRDTALPQERNKKLEAVGTGIEPKAMSQGLVTFGDVAVDFSQEEWEWLNPIQR 125
>AB083037-1|BAC19850.2| 705|Homo sapiens r subcomponent of
complement component 1 protein.
Length = 705
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 260 HCPYLLSSETTAKGTGLGESAGKEDPVELDSS 355
HCPY + A G +GE GK+ P +LD+S
Sbjct: 249 HCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>AB037852-1|BAA92669.1| 891|Homo sapiens KIAA1431 protein protein.
Length = 891
Score = 30.7 bits (66), Expect = 6.4
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 396 PTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWEFVNPFMR 235
P+ T L N +LE+ TG A S V V++D +WE++NP R
Sbjct: 95 PSRDTALPQERNKKLEAVGTGIEPKAMSQGLVTFGDVAVDFSQEEWEWLNPIQR 148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,912,705
Number of Sequences: 237096
Number of extensions: 2858674
Number of successful extensions: 6803
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6799
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -