Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1089
(797 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax prot... 29 5.6
Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax prot... 29 5.6
Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trit... 29 5.6
Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trit... 29 5.6
M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein ( D.me... 29 5.6
AY051904-1|AAK93328.1| 751|Drosophila melanogaster LD39445p pro... 29 5.6
AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE... 29 5.6
AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC... 29 5.6
AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB... 29 5.6
AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD... 29 5.6
AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA... 29 5.6
U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensit... 29 7.4
AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p pro... 29 7.4
AY069812-1|AAL39957.1| 937|Drosophila melanogaster SD05477p pro... 29 7.4
AY061451-1|AAL28999.1| 249|Drosophila melanogaster LD38807p pro... 29 7.4
AE014298-1945|AAN09334.1| 937|Drosophila melanogaster CG32627-P... 29 7.4
AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-P... 29 7.4
AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA... 29 7.4
>Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax protein
trxI protein.
Length = 3358
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = -3
Query: 552 ATSVSATSPLCTLGTNTVRP-----PILSTAHRFRPTE*VM----KQ*K*WFFSDDRAKR 400
+TS S++S C+L TN V P P +++ RPT V+ +Q ++
Sbjct: 2664 STSSSSSSSNCSLPTNVVNPMQQQAPSTTSSSTTRPTNRVLPMQQRQEPAPLSNECPVVS 2723
Query: 399 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 295
SPT P+ P ++ S+S + S P P+
Sbjct: 2724 SPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPV 2758
>Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax protein
trxII protein.
Length = 3726
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = -3
Query: 552 ATSVSATSPLCTLGTNTVRP-----PILSTAHRFRPTE*VM----KQ*K*WFFSDDRAKR 400
+TS S++S C+L TN V P P +++ RPT V+ +Q ++
Sbjct: 3032 STSSSSSSSNCSLPTNVVNPMQQQAPSTTSSSTTRPTNRVLPMQQRQEPAPLSNECPVVS 3091
Query: 399 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 295
SPT P+ P ++ S+S + S P P+
Sbjct: 3092 SPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPV 3126
>Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trithorax
protein protein.
Length = 3358
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = -3
Query: 552 ATSVSATSPLCTLGTNTVRP-----PILSTAHRFRPTE*VM----KQ*K*WFFSDDRAKR 400
+TS S++S C+L TN V P P +++ RPT V+ +Q ++
Sbjct: 2664 STSSSSSSSNCSLPTNVVNPMQQQAPSTTSSSTTRPTNRVLPMQQRQEPAPLSNECPVVS 2723
Query: 399 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 295
SPT P+ P ++ S+S + S P P+
Sbjct: 2724 SPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPV 2758
>Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trithorax
protein protein.
Length = 3726
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = -3
Query: 552 ATSVSATSPLCTLGTNTVRP-----PILSTAHRFRPTE*VM----KQ*K*WFFSDDRAKR 400
+TS S++S C+L TN V P P +++ RPT V+ +Q ++
Sbjct: 3032 STSSSSSSSNCSLPTNVVNPMQQQAPSTTSSSTTRPTNRVLPMQQRQEPAPLSNECPVVS 3091
Query: 399 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 295
SPT P+ P ++ S+S + S P P+
Sbjct: 3092 SPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPV 3126
>M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein (
D.melanogaster zinc-binding protein (trithorax) mRNA,
complete cds. ).
Length = 3759
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = -3
Query: 552 ATSVSATSPLCTLGTNTVRP-----PILSTAHRFRPTE*VM----KQ*K*WFFSDDRAKR 400
+TS S++S C+L TN V P P +++ RPT V+ +Q ++
Sbjct: 3065 STSSSSSSSNCSLPTNVVNPMQQQAPSTTSSSTTRPTNRVLPMQQRQEPAPLSNECPVVS 3124
Query: 399 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 295
SPT P+ P ++ S+S + S P P+
Sbjct: 3125 SPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPV 3159
>AY051904-1|AAK93328.1| 751|Drosophila melanogaster LD39445p
protein.
Length = 751
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = -3
Query: 552 ATSVSATSPLCTLGTNTVRP-----PILSTAHRFRPTE*VM----KQ*K*WFFSDDRAKR 400
+TS S++S C+L TN V P P +++ RPT V+ +Q ++
Sbjct: 57 STSSSSSSSNCSLPTNVVNPMQQQAPSTTSSSTTRPTNRVLPMQQRQEPAPLSNECPVVS 116
Query: 399 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 295
SPT P+ P ++ S+S + S P P+
Sbjct: 117 SPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPV 151
>AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE,
isoform E protein.
Length = 3358
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = -3
Query: 552 ATSVSATSPLCTLGTNTVRP-----PILSTAHRFRPTE*VM----KQ*K*WFFSDDRAKR 400
+TS S++S C+L TN V P P +++ RPT V+ +Q ++
Sbjct: 2664 STSSSSSSSNCSLPTNVVNPMQQQAPSTTSSSTTRPTNRVLPMQQRQEPAPLSNECPVVS 2723
Query: 399 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 295
SPT P+ P ++ S+S + S P P+
Sbjct: 2724 SPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPV 2758
>AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC,
isoform C protein.
Length = 3358
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = -3
Query: 552 ATSVSATSPLCTLGTNTVRP-----PILSTAHRFRPTE*VM----KQ*K*WFFSDDRAKR 400
+TS S++S C+L TN V P P +++ RPT V+ +Q ++
Sbjct: 2664 STSSSSSSSNCSLPTNVVNPMQQQAPSTTSSSTTRPTNRVLPMQQRQEPAPLSNECPVVS 2723
Query: 399 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 295
SPT P+ P ++ S+S + S P P+
Sbjct: 2724 SPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPV 2758
>AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB,
isoform B protein.
Length = 3358
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = -3
Query: 552 ATSVSATSPLCTLGTNTVRP-----PILSTAHRFRPTE*VM----KQ*K*WFFSDDRAKR 400
+TS S++S C+L TN V P P +++ RPT V+ +Q ++
Sbjct: 2664 STSSSSSSSNCSLPTNVVNPMQQQAPSTTSSSTTRPTNRVLPMQQRQEPAPLSNECPVVS 2723
Query: 399 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 295
SPT P+ P ++ S+S + S P P+
Sbjct: 2724 SPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPV 2758
>AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD,
isoform D protein.
Length = 3726
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = -3
Query: 552 ATSVSATSPLCTLGTNTVRP-----PILSTAHRFRPTE*VM----KQ*K*WFFSDDRAKR 400
+TS S++S C+L TN V P P +++ RPT V+ +Q ++
Sbjct: 3032 STSSSSSSSNCSLPTNVVNPMQQQAPSTTSSSTTRPTNRVLPMQQRQEPAPLSNECPVVS 3091
Query: 399 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 295
SPT P+ P ++ S+S + S P P+
Sbjct: 3092 SPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPV 3126
>AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA,
isoform A protein.
Length = 3726
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = -3
Query: 552 ATSVSATSPLCTLGTNTVRP-----PILSTAHRFRPTE*VM----KQ*K*WFFSDDRAKR 400
+TS S++S C+L TN V P P +++ RPT V+ +Q ++
Sbjct: 3032 STSSSSSSSNCSLPTNVVNPMQQQAPSTTSSSTTRPTNRVLPMQQRQEPAPLSNECPVVS 3091
Query: 399 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 295
SPT P+ P ++ S+S + S P P+
Sbjct: 3092 SPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPV 3126
>U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensitive
serotonin transporterprotein.
Length = 622
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 505 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 401
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p
protein.
Length = 622
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 505 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 401
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AY069812-1|AAL39957.1| 937|Drosophila melanogaster SD05477p
protein.
Length = 937
Score = 29.1 bits (62), Expect = 7.4
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -2
Query: 739 FAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGV 560
FA+P ++ D + P P E V+ E + H+ Y + VP N+P G+ L+P G
Sbjct: 181 FALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRPVGE 237
Query: 559 LNG 551
NG
Sbjct: 238 ENG 240
>AY061451-1|AAL28999.1| 249|Drosophila melanogaster LD38807p
protein.
Length = 249
Score = 29.1 bits (62), Expect = 7.4
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -2
Query: 412 SRETISHLCYTSHVSL---QCQTRVKLNRVFFPR*FSQARSLGC 290
S+ TI CY ++S QCQ R+ +VFF S A C
Sbjct: 14 SKRTIFETCYMKNISFLKTQCQARILFCKVFFAVHSSNANVPSC 57
>AE014298-1945|AAN09334.1| 937|Drosophila melanogaster CG32627-PB,
isoform B protein.
Length = 937
Score = 29.1 bits (62), Expect = 7.4
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -2
Query: 739 FAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGV 560
FA+P ++ D + P P E V+ E + H+ Y + VP N+P G+ L+P G
Sbjct: 181 FALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRPVGE 237
Query: 559 LNG 551
NG
Sbjct: 238 ENG 240
>AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-PA,
isoform A protein.
Length = 1201
Score = 29.1 bits (62), Expect = 7.4
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -2
Query: 739 FAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGV 560
FA+P ++ D + P P E V+ E + H+ Y + VP N+P G+ L+P G
Sbjct: 181 FALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRPVGE 237
Query: 559 LNG 551
NG
Sbjct: 238 ENG 240
>AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA
protein.
Length = 622
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 505 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 401
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,126,418
Number of Sequences: 53049
Number of extensions: 858065
Number of successful extensions: 2762
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2762
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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