Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1087
         (775 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6BK16 Cluster: Similar to CA0248|IPF7262 Candida albic...    33   6.0  
UniRef50_Q3M1D8 Cluster: Serine/Threonine protein kinase and Sig...    33   7.9  

>UniRef50_Q6BK16 Cluster: Similar to CA0248|IPF7262 Candida albicans
           IPF7262; n=1; Debaryomyces hansenii|Rep: Similar to
           CA0248|IPF7262 Candida albicans IPF7262 - Debaryomyces
           hansenii (Yeast) (Torulaspora hansenii)
          Length = 309

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +2

Query: 380 LNFQKAFINVLI*QSARYENGSNLISHVLIYNTIGYYN 493
           LN++   +NV+  Q+  + NG  L+  V +YNTIG  N
Sbjct: 254 LNYKLQLLNVVKEQNKAFRNGQVLVKEVKMYNTIGARN 291


>UniRef50_Q3M1D8 Cluster: Serine/Threonine protein kinase and Signal
            Transduction Histidine Kinase; n=9; Bacteria|Rep:
            Serine/Threonine protein kinase and Signal Transduction
            Histidine Kinase - Anabaena variabilis (strain ATCC 29413
            / PCC 7937)
          Length = 2361

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -3

Query: 458  VILSYCHFHNVHSVRLIHL*KPSENLKAELCNCVNVNSEYMLKLISYSLPLN-*HFFYLM 282
            V+  +C +H++  + L  L   S + K  L NCVN N E M K   ++ P+N  H FYL+
Sbjct: 1164 VLPVFCFYHSLTLLSL--LLDASNSEKLALLNCVNTNQEKMQKWAEHA-PMNYLHKFYLV 1220


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,539,738
Number of Sequences: 1657284
Number of extensions: 9772816
Number of successful extensions: 16914
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16908
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)