Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1087
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   3.6  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   4.7  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.7  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.7  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   6.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   6.3  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 313 NEYEISFNMYSELTFTQLHSSAF 381
           +E E  FN + E+    LH S F
Sbjct: 97  HELETKFNPHHEIKLQHLHQSKF 119


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +1

Query: 106 SH-CNFGLSSGTNIAEHG 156
           SH CN+G ++ TNI  +G
Sbjct: 209 SHLCNWGSANSTNIVSNG 226


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +1

Query: 106 SH-CNFGLSSGTNIAEHG 156
           SH CN+G ++ TNI  +G
Sbjct: 369 SHLCNWGSANSTNIVSNG 386


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +1

Query: 106 SH-CNFGLSSGTNIAEHG 156
           SH CN+G ++ TNI  +G
Sbjct: 369 SHLCNWGSANSTNIVSNG 386


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 727 AVGINYYCFCDKKSSI 774
           A GIN YCF +  S I
Sbjct: 182 AFGINTYCFRNDNSEI 197


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 255 YITYKCSVVHQIKKM 299
           YI+++  V H++KKM
Sbjct: 154 YISFESKVFHKLKKM 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,121
Number of Sequences: 336
Number of extensions: 3153
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)