Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1085
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    25   2.0  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   6.1  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   8.1  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   8.1  

>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 168 SARLASALEAFRHNPADGSFAPPAARPSAEPNVR 269
           S R A  + + R    DG   PP  RPS    +R
Sbjct: 499 SKRNAHTMASLREKLVDGGSTPPHCRPSDIEEIR 532


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 293 LSTRGTAVSDIWFCTRPSGRWCEATIRGIMPE 198
           L T+    +++ F  R S RWCE T+  ++ +
Sbjct: 349 LGTQVIGTTEV-FLDRESCRWCECTLGDLIAD 379


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 19/79 (24%), Positives = 32/79 (40%)
 Frame = -2

Query: 274 QFRTFGSALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSR 95
           Q + + + +G  AGG +        +   ++    + G +     PR   GSK     S 
Sbjct: 64  QPKDYSAPIGFIAGGIQQSGKKPEKDRKPSDEDDDDEGDEANDARPRF--GSKAAAANSS 121

Query: 94  VSQSKRETRRRSPFGSRRS 38
            + S+ E  RR+P    RS
Sbjct: 122 ATSSESEDERRTPPQDMRS 140


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 482 HKPVIPVVTFWHLLLKTLYTKGSIGRAFAVPMRTEHLDQAS 604
           H P + ++T WH  L+TL        AFA     E LD +S
Sbjct: 228 HLPNLRLLTLWHNKLRTLSR-----AAFAGVPELERLDLSS 263


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,748
Number of Sequences: 2352
Number of extensions: 12884
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)