Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1085
         (635 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    65   2e-10
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro...    33   0.85 
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      30   6.0  
BC014502-1|AAH14502.1|  110|Homo sapiens Unknown (protein for IM...    30   6.0  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    30   6.0  
AK027290-1|BAB55018.1|  433|Homo sapiens protein ( Homo sapiens ...    30   7.9  
AJ224874-1|CAA12175.1| 1966|Homo sapiens L-type calcium channel ...    30   7.9  
AJ006216-1|CAA06916.1| 1966|Homo sapiens L-type calcium channel ...    30   7.9  
AF201304-1|AAF15290.1| 1977|Homo sapiens voltage-gated L-type ca...    30   7.9  
AF067227-1|AAD03587.1| 1912|Homo sapiens voltage-gated L-type ca...    30   7.9  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 64.9 bits (151), Expect = 2e-10
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +1

Query: 421 MIGRADIEGSKSNVAMNAWLPQASYPCGNF 510
           MIGRADIEGSKS+VAMNAW PQASYPCGNF
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNF 30


>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting
           protein protein.
          Length = 1183

 Score = 33.1 bits (72), Expect = 0.85
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
 Frame = -2

Query: 376 RERELGLDRRETG*FYPTDGLSLR**YCSVREEPQFRTFGSALGRAAGGAKLPSAGLCLN 197
           R+R+  +D  ++   YP   L+LR     +RE+P + +F +   R   GA+    GL   
Sbjct: 78  RKRDAFMDHLKSK--YPQHALALRGQQDRMREQPNYWSFKTRSSRHTQGAQ---PGLADQ 132

Query: 196 ASKAEASLAESGKDMLTVEPRESGGSKQCDFTSR--VSQSKRETRRRSP 56
           A+K   + AES + M   E    G S+   F     +S+S  +T+ RSP
Sbjct: 133 AAKLSYASAESLETMSEAE-LPLGFSRMNRFRQSLPLSRSASQTKPRSP 180


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 198 TPLRPKPA*PNPARICSLWSPESRE 124
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>BC014502-1|AAH14502.1|  110|Homo sapiens Unknown (protein for
           IMAGE:4860374) protein.
          Length = 110

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = -2

Query: 247 GRAAGGAKLPSAGLCLNASKAEA-SLAESGKDMLTVEPRESGGSKQCDFTSRVSQSKRET 71
           G A  GA     G C + +K+E  +L + G   LTV  R+ G       T  + ++KRE 
Sbjct: 24  GEAGAGAPTGPWGSCPHQAKSEREALPQPGPPPLTVSARKQGHFLASWGTLEIRETKREE 83

Query: 70  RRRSP--FGSRRSTPSV 26
              +P   G   S P V
Sbjct: 84  EGDAPPTGGCEGSRPGV 100


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 198 TPLRPKPA*PNPARICSLWSPESRE 124
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AK027290-1|BAB55018.1|  433|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14384 fis, clone HEMBA1002150. ).
          Length = 433

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +1

Query: 127 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRP-LGRVQNQMS-ETAVPLVLSSI 300
           P L AP+  Y   + L   RP   S   P + ++H  P +      +S +  +P+++++ 
Sbjct: 107 PPLSAPRVPYHSSV-LSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIVANY 165

Query: 301 TIATTSHQ*GKTNLSHDGLIPAHVP 375
               +++Q G  ++SH    PAH P
Sbjct: 166 PDLPSAYQPGILSVSHSAQPPAHQP 190


>AJ224874-1|CAA12175.1| 1966|Homo sapiens L-type calcium channel
            alpha-1 subunit protein.
          Length = 1966

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 120  EPPDSRGSTVSISLPDSARLASALEAFRHNPADGSFAPPAARPSAEPNVRNCGSS 284
            +P   RGS +S+SLP   RL  +L      P+D     P    S++P+V   GS+
Sbjct: 1657 QPSARRGSGISVSLPVGDRLPDSLS---FGPSDDDRGTPT---SSQPSVPQAGSN 1705


>AJ006216-1|CAA06916.1| 1966|Homo sapiens L-type calcium channel
            alpha-1 subunit protein.
          Length = 1966

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 120  EPPDSRGSTVSISLPDSARLASALEAFRHNPADGSFAPPAARPSAEPNVRNCGSS 284
            +P   RGS +S+SLP   RL  +L      P+D     P    S++P+V   GS+
Sbjct: 1657 QPSARRGSGISVSLPVGDRLPDSLS---FGPSDDDRGTPT---SSQPSVPQAGSN 1705


>AF201304-1|AAF15290.1| 1977|Homo sapiens voltage-gated L-type calcium
            channel alpha-1 subunit protein.
          Length = 1977

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 120  EPPDSRGSTVSISLPDSARLASALEAFRHNPADGSFAPPAARPSAEPNVRNCGSS 284
            +P   RGS +S+SLP   RL  +L      P+D     P    S++P+V   GS+
Sbjct: 1668 QPSARRGSGISVSLPVGDRLPDSLS---FGPSDDDRGTPT---SSQPSVPQAGSN 1716


>AF067227-1|AAD03587.1| 1912|Homo sapiens voltage-gated L-type calcium
            channel alpha-1 subunit protein.
          Length = 1912

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 120  EPPDSRGSTVSISLPDSARLASALEAFRHNPADGSFAPPAARPSAEPNVRNCGSS 284
            +P   RGS +S+SLP   RL  +L      P+D     P    S++P+V   GS+
Sbjct: 1603 QPSARRGSGISVSLPVGDRLPDSLS---FGPSDDDRGTPT---SSQPSVPQAGSN 1651


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,430,411
Number of Sequences: 237096
Number of extensions: 2086554
Number of successful extensions: 5168
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5162
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)