Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1084
(506 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 118 6e-26
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 116 3e-25
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 115 5e-25
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 114 1e-24
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 114 1e-24
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 113 2e-24
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 113 3e-24
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 99 7e-20
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 99 7e-20
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 99 7e-20
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 98 1e-19
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 95 1e-18
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 91 1e-17
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 91 1e-17
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 91 2e-17
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 91 2e-17
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 88 9e-17
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 86 5e-16
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 83 4e-15
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 81 1e-14
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 81 1e-14
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 79 6e-14
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 77 3e-13
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 77 3e-13
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 76 4e-13
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 76 5e-13
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 76 5e-13
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 75 7e-13
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 75 7e-13
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 75 9e-13
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 53 2e-12
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 74 2e-12
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 73 5e-12
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 72 7e-12
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 72 7e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 72 9e-12
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 72 9e-12
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 71 1e-11
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 71 2e-11
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 71 2e-11
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 69 5e-11
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 69 5e-11
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 69 5e-11
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 69 8e-11
UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46; N... 67 2e-10
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 66 4e-10
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 65 8e-10
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 65 8e-10
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 64 1e-09
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 64 2e-09
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 64 2e-09
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 64 2e-09
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 63 4e-09
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 63 4e-09
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 62 7e-09
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 62 7e-09
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 61 1e-08
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 61 2e-08
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 61 2e-08
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 60 4e-08
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 59 5e-08
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 59 7e-08
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 58 2e-07
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 58 2e-07
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 57 2e-07
UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21; Pro... 57 2e-07
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 56 3e-07
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 56 3e-07
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 56 5e-07
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 54 1e-06
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 54 2e-06
UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71; P... 52 7e-06
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 52 1e-05
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 51 1e-05
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 51 2e-05
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 50 2e-05
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 50 3e-05
UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyc... 50 3e-05
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 50 4e-05
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 49 7e-05
UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21; A... 49 7e-05
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 48 9e-05
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 48 1e-04
UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79; Pte... 47 2e-04
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 46 4e-04
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 46 7e-04
UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39; Aph... 45 9e-04
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 45 0.001
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 43 0.003
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 43 0.003
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.011
UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4; Tali... 41 0.014
UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14; Neo... 41 0.019
UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5; Euma... 40 0.024
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 39 0.057
UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26; E... 39 0.075
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 39 0.075
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 38 0.099
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 38 0.099
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 38 0.13
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 36 0.40
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 36 0.40
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 36 0.40
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 36 0.53
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 36 0.70
UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI pro... 36 0.70
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 35 1.2
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 35 1.2
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 34 2.1
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 33 3.7
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 33 4.9
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 4.9
UniRef50_Q31DK3 Cluster: Putative uncharacterized protein; n=1; ... 32 6.5
UniRef50_Q98PT0 Cluster: MALTODEXTRIN ABC TRANSPORTER PERMEASE P... 32 8.6
UniRef50_A5FDI9 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 118 bits (285), Expect = 6e-26
Identities = 55/84 (65%), Positives = 64/84 (76%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS ++ +PLFTG +LN
Sbjct: 347 LFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLN 406
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
S KI F +FIGVN+TFFPQHF
Sbjct: 407 SVWTKIHFGVMFIGVNLTFFPQHF 430
Score = 41.9 bits (94), Expect = 0.008
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Frame = -1
Query: 320 YTKNSIFYNIYWS------KYNIFSTTFLGLAGIPRRYSDYPD 210
YT NS++ I++ F FLGLAG+PRRYSDYPD
Sbjct: 403 YTLNSVWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 116 bits (279), Expect = 3e-25
Identities = 54/80 (67%), Positives = 63/80 (78%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFTVGGLTGV+LANSSIDI LHDTYYVVAHFHYVLS + +PLFTG++LN
Sbjct: 260 LFTVGGLTGVVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGIVQWFPLFTGVTLN 319
Query: 325 SYILKIQFFTIFIGVNITFF 266
++ LKIQF +FIGVN+TFF
Sbjct: 320 NFFLKIQFIIMFIGVNLTFF 339
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 115 bits (277), Expect = 5e-25
Identities = 54/84 (64%), Positives = 63/84 (75%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFTVGGLTG++LANSSIDI LHDTYYVVAHFHYVLS ++ +PLFTG +L+
Sbjct: 347 LFTVGGLTGIVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLH 406
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
KI F +FIGVN+TFFPQHF
Sbjct: 407 DTWTKIHFGVMFIGVNLTFFPQHF 430
Score = 39.5 bits (88), Expect = 0.043
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -1
Query: 317 TKNSIFYNIYWSKYNI--FSTTFLGLAGIPRRYSDYPD 210
T I + + + N+ F FLGLAG+PRRYSDYPD
Sbjct: 408 TWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 114 bits (274), Expect = 1e-24
Identities = 53/84 (63%), Positives = 61/84 (72%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS + +PLFTG +LN
Sbjct: 348 LFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLN 407
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
S K F +F GVN+TFFPQHF
Sbjct: 408 SAWAKAHFGVMFTGVNLTFFPQHF 431
Score = 39.9 bits (89), Expect = 0.032
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 6/43 (13%)
Frame = -1
Query: 320 YTKNSIF----YNIYWSKYNI--FSTTFLGLAGIPRRYSDYPD 210
YT NS + + + ++ N+ F FLGLAG+PRRYSDYPD
Sbjct: 404 YTLNSAWAKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 114 bits (274), Expect = 1e-24
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFTVGGLTGV+L+NSS+D+ LHDTYY VAHFHYVLS I +P+F GL +N
Sbjct: 331 LFTVGGLTGVVLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGFIYWFPMFFGLMMN 390
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
Y LKI F+ FIGVN+ FFPQHF
Sbjct: 391 EYFLKIHFYLTFIGVNLIFFPQHF 414
Score = 48.4 bits (110), Expect = 9e-05
Identities = 29/82 (35%), Positives = 36/82 (43%)
Frame = -1
Query: 269 FSTTFLGLAGIPRRYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINQRINLFS 90
F FLGL+G+PRRYSDYPD I QR +F
Sbjct: 410 FPQHFLGLSGMPRRYSDYPDMYLNWNLFSSFGSLISLIGVFLFIFIIWESLIMQRFVIFV 469
Query: 89 LNLPSSIE*YQNLPPAEHSYNE 24
+ SSIE + PP +HSY+E
Sbjct: 470 KFINSSIEWFHLYPPLDHSYDE 491
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 113 bits (273), Expect = 2e-24
Identities = 53/84 (63%), Positives = 63/84 (75%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS I+ +PLF+G +L+
Sbjct: 347 LFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLD 406
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
KI F +FIGVN+TFFPQHF
Sbjct: 407 QTYAKIHFTIMFIGVNLTFFPQHF 430
Score = 38.3 bits (85), Expect = 0.099
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -1
Query: 317 TKNSIFYNIYWSKYNI--FSTTFLGLAGIPRRYSDYPD 210
T I + I + N+ F FLGL+G+PRRYSDYPD
Sbjct: 408 TYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPD 445
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 113 bits (271), Expect = 3e-24
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS + +PLFTG +LN
Sbjct: 348 LFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLN 407
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
+ K F +F GVN+TFFPQHF
Sbjct: 408 NAWAKAHFGVMFTGVNLTFFPQHF 431
Score = 39.1 bits (87), Expect = 0.057
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1
Query: 269 FSTTFLGLAGIPRRYSDYPD 210
F FLGLAG+PRRYSDYPD
Sbjct: 427 FPQHFLGLAGMPRRYSDYPD 446
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 98.7 bits (235), Expect = 7e-20
Identities = 46/84 (54%), Positives = 56/84 (66%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFT+GGLTG++L+NSS+DI LHDTYYVVAHFHYVLS + TG +
Sbjct: 314 LFTIGGLTGIVLSNSSLDILLHDTYYVVAHFHYVLSMGAVFAIFGGFYLWFGKITGYAYK 373
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
I F+ +F+GVNITFFPQHF
Sbjct: 374 DIYGLIHFWLMFLGVNITFFPQHF 397
Score = 38.3 bits (85), Expect = 0.099
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -1
Query: 269 FSTTFLGLAGIPRRYSDYPD 210
F FLGLAG+PRRY+DYPD
Sbjct: 393 FPQHFLGLAGLPRRYADYPD 412
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 98.7 bits (235), Expect = 7e-20
Identities = 46/84 (54%), Positives = 57/84 (67%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+FT+GGL+GV+LAN+S +I HDTYYVVAHFHYVLS P GLS +
Sbjct: 373 MFTIGGLSGVVLANASENIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKIIGLSYD 432
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
+ KI F+ +FIGVN+TFFPQHF
Sbjct: 433 TKASKIHFWILFIGVNLTFFPQHF 456
Score = 33.9 bits (74), Expect = 2.1
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 269 FSTTFLGLAGIPRRYSDYPD 210
F FLGL G+PRR SDYPD
Sbjct: 452 FPQHFLGLQGMPRRISDYPD 471
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 98.7 bits (235), Expect = 7e-20
Identities = 45/84 (53%), Positives = 54/84 (64%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+FT+GGL+GV+LAN+S+DI HDTYYVVAHFHYVLS P GL N
Sbjct: 347 MFTIGGLSGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKILGLDYN 406
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
K F+ +F GVN+TFFPQHF
Sbjct: 407 LLYSKAHFWVLFTGVNLTFFPQHF 430
Score = 35.5 bits (78), Expect = 0.70
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -1
Query: 323 LYTKNSIFYNIYWSKYNIFSTTFLGLAGIPRRYSDYPD 210
LY+K + F FLGL G+PRR SDYPD
Sbjct: 408 LYSKAHFWVLFTGVNLTFFPQHFLGLQGMPRRISDYPD 445
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 97.9 bits (233), Expect = 1e-19
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFT+GGLTG++LANS +DI+LHDTYYVVAHFHYVLS + TGL
Sbjct: 354 LFTIGGLTGIVLANSGLDISLHDTYYVVAHFHYVLSMGAVFAIFAGFYYWFGKITGLQYP 413
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
+ +I F++ FIGVN+TF P HF
Sbjct: 414 ETLGQIHFWSTFIGVNLTFMPMHF 437
Score = 33.1 bits (72), Expect = 3.7
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 257 FLGLAGIPRRYSDYPD 210
FLGLAG+PRR DYPD
Sbjct: 437 FLGLAGMPRRIPDYPD 452
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 94.7 bits (225), Expect = 1e-18
Identities = 42/84 (50%), Positives = 53/84 (63%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFTVGG+TGV+LAN +D LHDTYYVVAHFHYVLS +P +G N
Sbjct: 389 LFTVGGVTGVVLANGGVDDVLHDTYYVVAHFHYVLSLGAVFGLFAGFYYWFPKMSGKMYN 448
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
++ ++ F+ F GVN+ FFP HF
Sbjct: 449 EFLGQLHFWVFFAGVNLLFFPMHF 472
Score = 34.3 bits (75), Expect = 1.6
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1
Query: 269 FSTTFLGLAGIPRRYSDYPD 210
F FLGL+G+PRRY DYP+
Sbjct: 468 FPMHFLGLSGMPRRYPDYPE 487
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 91.5 bits (217), Expect = 1e-17
Identities = 42/84 (50%), Positives = 53/84 (63%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFTVGGL+G+IL+ +S+DI LHDTYYVVAHFHY LS P G+S +
Sbjct: 357 LFTVGGLSGIILSAASLDIILHDTYYVVAHFHYTLSLGAIYGIFCGFCLWLPYMYGISFD 416
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
S ++ F F+G N+TFFP HF
Sbjct: 417 SVMMMAVFVCFFVGTNMTFFPMHF 440
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 91.1 bits (216), Expect = 1e-17
Identities = 43/84 (51%), Positives = 52/84 (61%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFT+GGLTG++LANS +DI LHDTYYVVAHFHYVLS G +
Sbjct: 349 LFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYP 408
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
+ +I F+ F GVN+TFFP HF
Sbjct: 409 ETLGQIHFWITFFGVNLTFFPMHF 432
Score = 32.7 bits (71), Expect = 4.9
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 269 FSTTFLGLAGIPRRYSDYPD 210
F FLGL+G+PRR DYPD
Sbjct: 428 FPMHFLGLSGMPRRIPDYPD 447
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 90.6 bits (215), Expect = 2e-17
Identities = 41/84 (48%), Positives = 54/84 (64%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFT+GG+TG+IL+N+ ID ++HDT+YVV HFHYVLS + TGLS +
Sbjct: 350 LFTIGGITGIILSNAGIDTSIHDTHYVVGHFHYVLSMGAVFAIYGGFYYWWGKMTGLSYS 409
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
+ + F+ FIGVN TFFP HF
Sbjct: 410 ESLGQAHFWMTFIGVNFTFFPMHF 433
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 90.6 bits (215), Expect = 2e-17
Identities = 42/84 (50%), Positives = 53/84 (63%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFT+GGLTGVILAN+++ LHD+YYVVAHFHYVLS +P +TG+
Sbjct: 353 LFTIGGLTGVILANAALSTLLHDSYYVVAHFHYVLSMGAVFAIFGGFWFWFPFWTGMVPR 412
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
++ F FIGVN TFFP H+
Sbjct: 413 KDLVLTHFMLTFIGVNFTFFPMHW 436
Score = 34.3 bits (75), Expect = 1.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 278 YNIFSTTFLGLAGIPRRYSDYPD 210
+ F ++GL G+PRRY DYPD
Sbjct: 429 FTFFPMHWMGLTGMPRRYQDYPD 451
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 88.2 bits (209), Expect = 9e-17
Identities = 42/73 (57%), Positives = 53/73 (72%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFTVGGLTG+ILANSS+DI LHDTYYVVAHFHYVLS ++ +PLF+G +L+
Sbjct: 112 LFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLH 171
Query: 325 SYILKIQFFTIFI 287
+ KI F +F+
Sbjct: 172 NTWTKIHFGVMFM 184
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 85.8 bits (203), Expect = 5e-16
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFTVGG+TGV L+ S++DI HDT++VVAHFHYVLS + +P G SLN
Sbjct: 438 LFTVGGVTGVALSASALDILFHDTWFVVAHFHYVLSLGSYSSIVIMLVWWWPFIVGYSLN 497
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
Y+L+ + +G N+ FFP H+
Sbjct: 498 KYLLQGHWLLSMVGFNLCFFPMHY 521
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 83.0 bits (196), Expect = 4e-15
Identities = 38/84 (45%), Positives = 49/84 (58%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFT+GG TG+IL+ + +D HDTYYVVAHFHYV+S +G
Sbjct: 452 LFTLGGTTGIILSQAGVDRAYHDTYYVVAHFHYVMSLGAVFGIFAAVYYWIGKMSGRQYP 511
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
+ ++ F+ FIG NITFFPQHF
Sbjct: 512 EWAGQVHFWVFFIGTNITFFPQHF 535
Score = 32.3 bits (70), Expect = 6.5
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -1
Query: 269 FSTTFLGLAGIPRRYSDYPD 210
F FLG G+PRRY DYPD
Sbjct: 531 FPQHFLGRQGMPRRYIDYPD 550
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 81.4 bits (192), Expect = 1e-14
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+F +GGL+GV++A+ D+ HDTY+VVAHFHYVL YP FTG ++
Sbjct: 368 IFIIGGLSGVMVASVPFDMQAHDTYFVVAHFHYVLIGGAVFPLLGGLYYWYPKFTGRMMS 427
Query: 325 SYILKIQFFTIFIGVNITFFPQH 257
+ K+ F+ F G N+TFFP H
Sbjct: 428 ERLGKVAFWVTFAGFNLTFFPMH 450
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 81.0 bits (191), Expect = 1e-14
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFT+GGLTG++LANSSID+ LHDTYYVVAHFHYVLS + +PLF+G +L+
Sbjct: 324 LFTLGGLTGIVLANSSIDVVLHDTYYVVAHFHYVLSMGAVFAIFAGFTHWFPLFSGYNLH 383
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 79.0 bits (186), Expect = 6e-14
Identities = 35/82 (42%), Positives = 49/82 (59%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F +GGLTGV++A+ DI +HDTY+VV HFHYVL + +P TG +N
Sbjct: 358 FMIGGLTGVMVASVPFDIHVHDTYFVVGHFHYVLFGGSAFALFSGVYHWFPKMTGRMVNE 417
Query: 322 YILKIQFFTIFIGVNITFFPQH 257
+ ++ F FIG+N+TF P H
Sbjct: 418 PLGRLHFILTFIGMNLTFMPMH 439
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 76.6 bits (180), Expect = 3e-13
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+FTVGG+TGV++A ID +HDTY+VVAHFHYVL P F+ L+
Sbjct: 374 IFTVGGVTGVMVALVPIDFQVHDTYFVVAHFHYVLIGGMVFPLFATFYYWIPAFSRNMLS 433
Query: 325 SYILKIQFFTIFIGVNITFFPQH 257
+ + F+ +FIG N+TFFP H
Sbjct: 434 ERLGRWVFWLMFIGFNVTFFPMH 456
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 76.6 bits (180), Expect = 3e-13
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LFTVGGLTGV+LANSS+DI LHDTYYVVAHFHYVLS P +
Sbjct: 51 LFTVGGLTGVVLANSSLDIVLHDTYYVVAHFHYVLSMGACICYYVSIYPLMPFINWVINK 110
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
++K F FP F
Sbjct: 111 PLMIKNSIFNNIFSCKFNIFPPTF 134
Score = 43.2 bits (97), Expect = 0.003
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = -1
Query: 383 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFLGLA 243
C Y IY L+ FI K L KNSIF NI+ K+NIF TFL ++
Sbjct: 92 CYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSIS 138
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 76.2 bits (179), Expect = 4e-13
Identities = 34/84 (40%), Positives = 46/84 (54%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+F VGGL+G+ +A +D+ HDTY++VAHFHY+L +P G +N
Sbjct: 398 MFIVGGLSGIFMAAVPVDVYFHDTYFIVAHFHYILFGATLFGVFAGIQFWFPKMFGRMMN 457
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
+ K F FIG N TFFP HF
Sbjct: 458 EKLGKTHFVLTFIGANGTFFPMHF 481
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 75.8 bits (178), Expect = 5e-13
Identities = 33/84 (39%), Positives = 49/84 (58%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+F GG+TG+IL N+++DI LHDTYYVVAHFH V+ + +P G ++
Sbjct: 408 MFISGGVTGIILGNNAMDIQLHDTYYVVAHFHLVMGSASFFGMMAGVYHWFPKMFGRMMD 467
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
+ I F+ F+G + FFP H+
Sbjct: 468 EKLGYIHFWFTFVGAYLVFFPMHY 491
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 75.8 bits (178), Expect = 5e-13
Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSL-N 326
FT GG TGVIL N +ID+ LHDTYYV+AHFH+VLS F G +L
Sbjct: 58 FTFGGTTGVILGNGAIDVALHDTYYVIAHFHFVLSIGAIIALFTSVSFFQESFFGKTLRE 117
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
+ I+ + F+GV +TF P HF
Sbjct: 118 NTIIVLWSILFFVGVVLTFLPMHF 141
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 75.4 bits (177), Expect = 7e-13
Identities = 35/83 (42%), Positives = 48/83 (57%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+F +GGLTGV++A+ D +HDTY+VVAHFHYVL +P TG ++
Sbjct: 362 VFVIGGLTGVMVASVPFDTQVHDTYFVVAHFHYVLVGGAVFPLLGAIYYWFPKLTGRMMS 421
Query: 325 SYILKIQFFTIFIGVNITFFPQH 257
+ + F IF G N+TFFP H
Sbjct: 422 ETLGRWSFGLIFSGFNLTFFPMH 444
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 75.4 bits (177), Expect = 7e-13
Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSL-N 326
FT GG TGVIL N++ID+ LHDTYYV+AHFH+VLS F G +L
Sbjct: 354 FTFGGTTGVILGNAAIDVALHDTYYVIAHFHFVLSIGAIIGLFTTVSAFQDNFFGKNLRE 413
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
+ I+ + F+GV +TF P HF
Sbjct: 414 NSIVILWSMLFFVGVILTFLPMHF 437
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 74.9 bits (176), Expect = 9e-13
Identities = 39/68 (57%), Positives = 43/68 (63%)
Frame = -2
Query: 493 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYIL 314
GGLTGVILANSS DI LHDTYYVVAH HYVLS + +PLFTGL+L I
Sbjct: 269 GGLTGVILANSSXDIILHDTYYVVAHXHYVLSMGAVFAILAGIVQWFPLFTGLTLTMNIK 328
Query: 313 KIQFFTIF 290
F I+
Sbjct: 329 NTIFSYIY 336
Score = 36.3 bits (80), Expect = 0.40
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -1
Query: 314 KNSIFYNIYWSKYNIFSTTFLGLA 243
KN+IF IYWSK+NIFS+T ++
Sbjct: 328 KNTIFSYIYWSKFNIFSSTLCSIS 351
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 53.2 bits (122), Expect(2) = 2e-12
Identities = 25/62 (40%), Positives = 33/62 (53%)
Frame = -2
Query: 439 DTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQ 260
+T + HFHYVLS P G + + + K+QF+ +FIGVN TFFPQ
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWLLFIGVNATFFPQ 535
Query: 259 HF 254
HF
Sbjct: 536 HF 537
Score = 40.7 bits (91), Expect(2) = 2e-12
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -2
Query: 487 LTGVILANSSIDITLHDTYYVVA 419
++GV+LAN+S+DI HDTYYVVA
Sbjct: 426 VSGVVLANASLDIAFHDTYYVVA 448
Score = 33.9 bits (74), Expect = 2.1
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 269 FSTTFLGLAGIPRRYSDYPD 210
F FLGL G+PRR SDYPD
Sbjct: 533 FPQHFLGLQGMPRRISDYPD 552
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 73.7 bits (173), Expect = 2e-12
Identities = 36/83 (43%), Positives = 48/83 (57%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F +GG+TGV+LA ++ D HDTY+VVAHFHYV+ +P G L+
Sbjct: 356 FVLGGVTGVMLAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKMFGKILHE 415
Query: 322 YILKIQFFTIFIGVNITFFPQHF 254
+ KI F FIG ++TFF QHF
Sbjct: 416 TMGKISFVLFFIGFHLTFFIQHF 438
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 72.5 bits (170), Expect = 5e-12
Identities = 37/83 (44%), Positives = 48/83 (57%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F +GG+TGV+LA ++ D H+TY++V+HFHYVL I YP G LN
Sbjct: 387 FVIGGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAGTVFACFAGFIFWYPKMFGHKLNE 446
Query: 322 YILKIQFFTIFIGVNITFFPQHF 254
I K F+ IG NI FFPQ+F
Sbjct: 447 RIGKWFFWIFMIGFNICFFPQYF 469
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 72.1 bits (169), Expect = 7e-12
Identities = 37/83 (44%), Positives = 46/83 (55%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F +GGLTG++ A ID L DTY+VVAHFHYVL +P TG LN
Sbjct: 366 FVIGGLTGIMFAAVPIDWQLTDTYFVVAHFHYVLIGGLVFALFSAAYYWFPKMTGRMLNE 425
Query: 322 YILKIQFFTIFIGVNITFFPQHF 254
I +QF+ +G N+TF QHF
Sbjct: 426 RIGILQFWLWVLGFNMTFMVQHF 448
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 72.1 bits (169), Expect = 7e-12
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+F +GG+TG++LANS +D+ +HD+YYVVAHFHYVLS ++ + L +G
Sbjct: 103 MFLLGGVTGLVLANSEVDLVMHDSYYVVAHFHYVLSLGAVFGLLNGVLSCHELCSGYRSA 162
Query: 325 SYILKIQFFTIFIGVNITFFPQH 257
+++L++Q + G F+ H
Sbjct: 163 AWLLRVQVVLLVWGTTCIFWGMH 185
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 71.7 bits (168), Expect = 9e-12
Identities = 33/79 (41%), Positives = 45/79 (56%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F +GG+TGV LA+ +D+ LH TYYVV HFHY++ +PL+TG
Sbjct: 432 FILGGVTGVFLASIPVDLVLHATYYVVGHFHYIVMGAIAFAGFAGIYYWFPLYTGRMYQR 491
Query: 322 YILKIQFFTIFIGVNITFF 266
+ K+ F+ IG NITFF
Sbjct: 492 TLGKMHFWLSMIGTNITFF 510
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 71.7 bits (168), Expect = 9e-12
Identities = 33/83 (39%), Positives = 44/83 (53%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F GGLTG+ L N +D+ L DT +VVAHFH V+ + YP TG LN
Sbjct: 387 FVNGGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVAPIMVVLGAIYHWYPKVTGRMLND 446
Query: 322 YILKIQFFTIFIGVNITFFPQHF 254
+ K F+ F+G + FFP H+
Sbjct: 447 VLGKFHFWVTFLGAYLIFFPMHY 469
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 71.3 bits (167), Expect = 1e-11
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+F +GGL+G+ +A + +DI +HDTY++VAHFHYVL +P G +N
Sbjct: 395 MFVIGGLSGIFMAATPVDIVIHDTYFIVAHFHYVLFAGTAMAVFGSIYFWFPKMFGRMMN 454
Query: 325 SYILKIQFFTIFIGVNITFFPQH 257
KI F FI +N TFF H
Sbjct: 455 ETAGKIHFALTFIFLNGTFFTMH 477
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 70.9 bits (166), Expect = 2e-11
Identities = 32/83 (38%), Positives = 47/83 (56%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+FT GGLTGV++A + D +HDTY++VAH HY L YP+ T +L+
Sbjct: 388 VFTAGGLTGVMVAIAPFDWQVHDTYFIVAHLHYTLFGGMVFPIIAGVYYFYPVITKKALS 447
Query: 325 SYILKIQFFTIFIGVNITFFPQH 257
+ + F+ +F G N+TF P H
Sbjct: 448 ERLGRWSFWLLFTGFNVTFLPMH 470
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+F VGG++GV+ A +D L DTY+VVAH HYVL +P FTG +N
Sbjct: 382 MFVVGGVSGVMTAAVPLDWQLTDTYFVVAHLHYVLLGINVFPVLGGVAYWFPKFTGRMMN 441
Query: 325 SYILKIQFFTIFIGVNITFFPQH 257
K+ F+ + +G N+ FFP H
Sbjct: 442 ERFGKLTFWVVLVGFNLGFFPMH 464
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 69.3 bits (162), Expect = 5e-11
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+F +GG++GV LA+ I++ D+YYVVAH HYVL +P TG L+
Sbjct: 364 MFIIGGISGVTLASPPINVQQTDSYYVVAHMHYVLFGGAIQGIFAGIFYWFPKMTGRMLD 423
Query: 325 SYILKIQFFTIFIGVNITFFPQH 257
+ K QF+ + I N+TFFP H
Sbjct: 424 ERLGKWQFWLMLISFNLTFFPMH 446
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 69.3 bits (162), Expect = 5e-11
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = -1
Query: 113 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 6
NQRI LFSLN+PSSIE YQNLPPAEHSYNELPIL N
Sbjct: 451 NQRIILFSLNMPSSIEWYQNLPPAEHSYNELPILSN 486
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 69.3 bits (162), Expect = 5e-11
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+F +G +TG+ L+N IDI LHDTY+VV HFHYVLS I + L L +
Sbjct: 349 MFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFI--HFLAKWLPIE 406
Query: 325 SYILKIQFF--TIFIGVNITFFPQH 257
Y+ + +F T+FIG N+ FFP H
Sbjct: 407 LYLFWMFYFISTLFIGSNMLFFPMH 431
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 68.5 bits (160), Expect = 8e-11
Identities = 35/80 (43%), Positives = 45/80 (56%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LF +GGLTGV LA S+ + L +TYYVV HFHYV++ +P TG N
Sbjct: 347 LFLIGGLTGVPLALVSLTVHLSETYYVVGHFHYVMAVAGTFAIFGGVYYIFPKMTGKMYN 406
Query: 325 SYILKIQFFTIFIGVNITFF 266
I K F+ F+GVNI F+
Sbjct: 407 ETIGKWAFWITFVGVNIVFW 426
>UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46;
Neoptera|Rep: Cytochrome c oxidase subunit I - Eueides
tales
Length = 95
Score = 67.3 bits (157), Expect = 2e-10
Identities = 36/74 (48%), Positives = 39/74 (52%)
Frame = -1
Query: 227 YSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINQRINLFSLNLPSSIE*YQNLP 48
YSDYPD INQR+ LFSLN+PSSIE YQN P
Sbjct: 1 YSDYPDNYMSWNIISSFGSYISLFSMILIIIIIWESMINQRMILFSLNMPSSIEWYQNFP 60
Query: 47 PAEHSYNELPILRN 6
P+EHSYNELPIL N
Sbjct: 61 PSEHSYNELPILSN 74
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 66.1 bits (154), Expect = 4e-10
Identities = 33/84 (39%), Positives = 43/84 (51%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+F GG++G LA SIDI LH TY+VV HFH V+ +P TG +N
Sbjct: 394 MFVSGGVSGFFLAQPSIDIYLHATYFVVGHFHLVMGVAAIFGVFAGTYFWFPKMTGHMMN 453
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
+ KI F+ FIG F P H+
Sbjct: 454 ETLGKIHFWGTFIGAYCIFMPFHY 477
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 65.3 bits (152), Expect = 8e-10
Identities = 32/84 (38%), Positives = 46/84 (54%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+F +GGLTGV++A D HD+Y++VAH HYVL P + +L+
Sbjct: 435 IFVLGGLTGVMVAVIPFDWQAHDSYFIVAHLHYVLVGGMVFPLFAAFYYWMPYTSRQALS 494
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
+ + F +F+G NITFFP HF
Sbjct: 495 ERLGRWVFGLMFVGFNITFFPMHF 518
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 65.3 bits (152), Expect = 8e-10
Identities = 30/78 (38%), Positives = 41/78 (52%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F +GG+TGV LA ID+ LHDTYYVV HFH+++ +P+ TG
Sbjct: 401 FIIGGVTGVFLAVIPIDLILHDTYYVVGHFHFIVYGAIGFALFAASYYWFPMVTGRMYQK 460
Query: 322 YILKIQFFTIFIGVNITF 269
+ F+T +G N TF
Sbjct: 461 RLAHAHFWTALVGSNATF 478
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 64.5 bits (150), Expect = 1e-09
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 398
LFT+GG TGV++ N+ +DI LHDTYY+VAHFH+VLS
Sbjct: 61 LFTLGGTTGVVMGNAGMDIALHDTYYIVAHFHFVLS 96
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 64.1 bits (149), Expect = 2e-09
Identities = 33/81 (40%), Positives = 42/81 (51%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LF +GG+TGV L +D TY+VVAHFHYV+ YP TG N
Sbjct: 368 LFIIGGITGVFLGAIVLDYQFRGTYWVVAHFHYVM-VAGATALFGGLYYWYPKITGKMYN 426
Query: 325 SYILKIQFFTIFIGVNITFFP 263
+ KIQF F+G N+ +FP
Sbjct: 427 ETLGKIQFGVYFLGFNLLYFP 447
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 64.1 bits (149), Expect = 2e-09
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F GGLTG++LA+ +D L D+Y+++AHFHY L +P TG ++
Sbjct: 370 FLFGGLTGIMLASPPLDFHLADSYFLIAHFHYTLFGTVVFASCAGVYFWFPKMTGRMMDE 429
Query: 322 YILKIQFFTIFIGVNITFFPQHF 254
+ KI F+ F+G + TF QH+
Sbjct: 430 RLGKIHFWLTFVGFHGTFLIQHW 452
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 63.7 bits (148), Expect = 2e-09
Identities = 31/83 (37%), Positives = 44/83 (53%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F G+TGV+LA IDI + +TY+VVAHFHYV+ + +P FTG
Sbjct: 373 FIFAGITGVMLATVPIDIHVGNTYFVVAHFHYVIFNTIVFGVFAGIYHWFPKFTGKMYYE 432
Query: 322 YILKIQFFTIFIGVNITFFPQHF 254
+ K+ F FIG + + P H+
Sbjct: 433 GLGKVHFVLTFIGATLNWLPLHW 455
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 62.9 bits (146), Expect = 4e-09
Identities = 30/83 (36%), Positives = 45/83 (54%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+F +GG+TGV++A ++ HD+Y+VVAH HYVL P FTG ++
Sbjct: 388 IFVLGGMTGVMVAAVPFNLQAHDSYFVVAHLHYVLIGGMVFPMFGALYYWVPHFTGRMMS 447
Query: 325 SYILKIQFFTIFIGVNITFFPQH 257
+ K F+ +F G N+ FF H
Sbjct: 448 ERLGKWVFWLMFSGFNLAFFMMH 470
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 62.9 bits (146), Expect = 4e-09
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*Y-PLFTGLSLN 326
F +GG TGV+L N+ ID+ LHDT YVV HFH+VLS I L G+ L+
Sbjct: 354 FVIGGTTGVVLGNAGIDLALHDTVYVVGHFHFVLSIGAIISMICFIIYIQRMLLFGIILS 413
Query: 325 SYILKIQFFTIFIGVNITFFPQHF 254
+ + + I V +TF P HF
Sbjct: 414 NRLSSLIAPIFMISVLLTFLPMHF 437
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 62.1 bits (144), Expect = 7e-09
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+F +GGLTG+ L +ID+ + D+ +VV HFHYVL I+ +PL TG
Sbjct: 302 MFLIGGLTGLPLGMVAIDLGVSDSLFVVGHFHYVLGMAITLGILGAVIHWFPLATGKYYP 361
Query: 325 SYILKIQFFTIFIGVNITFFPQ 260
+ K+ F+ IF G NI +F Q
Sbjct: 362 ENLGKLSFWLIFAGANIFYFLQ 383
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 62.1 bits (144), Expect = 7e-09
Identities = 28/82 (34%), Positives = 45/82 (54%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F +GG+TGV+L+ + +D HD+Y+VVAHFH VL +P TG +
Sbjct: 357 FLLGGITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMTGRMYDE 416
Query: 322 YILKIQFFTIFIGVNITFFPQH 257
+ ++ F+ +G +TF PQ+
Sbjct: 417 RLGRLHFWLFLVGYLLTFLPQY 438
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 61.3 bits (142), Expect = 1e-08
Identities = 29/82 (35%), Positives = 41/82 (50%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F GG TG++L++ S+DI LHDTY+VV HFH VLS P+ S+
Sbjct: 358 FCFGGFTGLLLSSGSLDIMLHDTYFVVGHFHTVLSLAATFGLLIAHYFFLPIIFSYSIFE 417
Query: 322 YILKIQFFTIFIGVNITFFPQH 257
F + +G + F+P H
Sbjct: 418 SFSFYHTFLLLVGALLVFYPMH 439
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 60.9 bits (141), Expect = 2e-08
Identities = 29/83 (34%), Positives = 44/83 (53%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F +GG++GV ++ +ID +H YYVVAHFHY + +P FTG +
Sbjct: 376 FMIGGVSGVTQSSLAIDTIVHGDYYVVAHFHYFMVGVAVMGLMGNLYYYFPKFTGRMYSE 435
Query: 322 YILKIQFFTIFIGVNITFFPQHF 254
+ +I + + GVNI +FP F
Sbjct: 436 KLGRIHWAFAYPGVNILYFPMFF 458
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 60.9 bits (141), Expect = 2e-08
Identities = 31/81 (38%), Positives = 42/81 (51%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F +GG TGV L + +ID TY+VVAHFHY+L +P TG + +
Sbjct: 355 FIIGGSTGVYLGSIAIDRGFRGTYWVVAHFHYILVGTVTLGLIAGLYYWWPKITGRTYSE 414
Query: 322 YILKIQFFTIFIGVNITFFPQ 260
+ KI F +GV +TF PQ
Sbjct: 415 RLGKIHFALAMLGVALTFLPQ 435
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 59.7 bits (138), Expect = 4e-08
Identities = 28/79 (35%), Positives = 43/79 (54%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+F VGGLTG+ L + S+D+ LHDT +VV HFH+ ++ +P G L
Sbjct: 384 VFGVGGLTGLFLGDISMDLYLHDTMFVVGHFHFTMAAASVMGAFTGIYFWFPKMFGRRLG 443
Query: 325 SYILKIQFFTIFIGVNITF 269
+ KI F+ F+G+ + F
Sbjct: 444 ERLGKIHFWFTFLGLTLVF 462
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 59.3 bits (137), Expect = 5e-08
Identities = 40/77 (51%), Positives = 43/77 (55%)
Frame = -2
Query: 244 LEYLDDIQIIQTHIFHEI*FLH*VHIFLYYQ***Y*LLFENQ*LTNELTYFL*ISHHQLN 65
LEYLDDI IIQ EI F H F Y LLFENQ EL Y + LN
Sbjct: 431 LEYLDDILIIQILTSLEISFHHSDLTFHCLPSYSYSLLFENQSFITELLYLPSMYLLLLN 490
Query: 64 DIKIYHQQNIHIMNYQF 14
D KIY QQ+IH+MNYQF
Sbjct: 491 DTKIYLQQSIHMMNYQF 507
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 58.8 bits (136), Expect = 7e-08
Identities = 31/82 (37%), Positives = 42/82 (51%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
FT+GGL+G + A + D HDTY+VVAHFHYVL + +P G L+
Sbjct: 367 FTIGGLSGFMHAAAPSDAQQHDTYFVVAHFHYVLIGGSIFAILSGIHHWFPKVFGRMLDE 426
Query: 322 YILKIQFFTIFIGVNITFFPQH 257
+ + F IF G + FP H
Sbjct: 427 RLGRWSFALIFTGFHTFAFPFH 448
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = -2
Query: 493 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYIL 314
GG+TG+ LA S+D+ HDTY++VAHFH+++ +P G L
Sbjct: 369 GGMTGIALATVSLDVHWHDTYFIVAHFHFIMVGATVMAFLAALHYWFPKIAGKRLPEGWG 428
Query: 313 KIQFFTIFIGVNITFFPQ 260
+ I +G N TF PQ
Sbjct: 429 LVAAVMIILGFNFTFIPQ 446
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 57.6 bits (133), Expect = 2e-07
Identities = 30/83 (36%), Positives = 38/83 (45%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LF G GV+ A +D T HDTY+VV HFH + +P TG N
Sbjct: 348 LFFSAGAGGVLNAAMPLDFTTHDTYWVVGHFHLFVMGTIAFGSIGFFYYMFPFVTGRMYN 407
Query: 325 SYILKIQFFTIFIGVNITFFPQH 257
+ KI F F+G + FF QH
Sbjct: 408 EKLGKIHFVFSFVGAVLLFFTQH 430
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 57.2 bits (132), Expect = 2e-07
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -2
Query: 502 FTV-GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
FTV GG+TG+ L S+D+ HDTY+VVAHFH+++ +P G + +
Sbjct: 372 FTVFGGMTGIALGTVSLDVAWHDTYFVVAHFHFIMVGATIMAFLAALHYWFPKMFGRTYH 431
Query: 325 SYILKIQFFTIFIGVNITFFPQ 260
+ I +G N TF PQ
Sbjct: 432 EGWGLVAAALIILGFNATFIPQ 453
>UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21;
Prodoxidae|Rep: Cytochrome oxidase subunit I - Greya
powelli
Length = 52
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = -1
Query: 113 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 6
N+ I LFSLN+ SSIE QN PPAEHSYNELPIL N
Sbjct: 16 NKNIVLFSLNMNSSIEWLQNFPPAEHSYNELPILTN 51
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 56.4 bits (130), Expect = 3e-07
Identities = 28/80 (35%), Positives = 40/80 (50%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F +GGLTG+ A+ D+ LH+TY+V+AHFH +P TG +N
Sbjct: 439 FLIGGLTGIFNADVPADLQLHNTYWVIAHFHIRCFGGVIFTWIAALYWWFPKVTGRKINE 498
Query: 322 YILKIQFFTIFIGVNITFFP 263
+ K + F+ N TFFP
Sbjct: 499 FWGKFHAWWSFVFFNCTFFP 518
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 56.4 bits (130), Expect = 3e-07
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 398
F +GG +G+IL+N+S+D LHDTYYVVAHFH V++
Sbjct: 332 FAIGGTSGIILSNASVDHYLHDTYYVVAHFHIVVA 366
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 56.0 bits (129), Expect = 5e-07
Identities = 30/83 (36%), Positives = 41/83 (49%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F +GGLTGV++A D +HDTY++VAH HYVL P FTG
Sbjct: 363 FVIGGLTGVMVAIVPFDWQVHDTYFIVAHLHYVLIGGFVFPMLAALYYWLPHFTGRKTYF 422
Query: 322 YILKIQFFTIFIGVNITFFPQHF 254
+ F+ + IG + TF H+
Sbjct: 423 NLGPTAFWLVVIGFHGTFLLLHW 445
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 54.4 bits (125), Expect = 1e-06
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVA 419
LFT+GG+TGV++ANSS+DI HDTYYVVA
Sbjct: 364 LFTIGGVTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 53.6 bits (123), Expect = 2e-06
Identities = 27/83 (32%), Positives = 41/83 (49%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F +GGLTGV++A D +HDT+++VAH HYVL P TG
Sbjct: 363 FVIGGLTGVMVAVVPFDWQVHDTHFIVAHLHYVLVGGFVFPMLAALYYWMPHVTGRKRFF 422
Query: 322 YILKIQFFTIFIGVNITFFPQHF 254
+ + F+ + +G + TF H+
Sbjct: 423 RVGDVAFWLVTVGFHATFLAVHW 445
>UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71;
Pancrustacea|Rep: Cytochrome c oxidase subunit I -
Psilochaeta pampiana
Length = 76
Score = 52.0 bits (119), Expect = 7e-06
Identities = 30/75 (40%), Positives = 36/75 (48%)
Frame = -1
Query: 230 RYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINQRINLFSLNLPSSIE*YQNL 51
RY+DYP+ I QR+ LFS+ L SSIE QN
Sbjct: 1 RYADYPEVHTTWNVISTIGSTISFLGILYFFYIIWESLITQRMVLFSIQLCSSIEWLQNS 60
Query: 50 PPAEHSYNELPILRN 6
PPAEHSY+ELP+L N
Sbjct: 61 PPAEHSYSELPLLTN 75
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/82 (34%), Positives = 39/82 (47%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F +GG+TGV L D + +YYVVAHFH V+ +P TG L+
Sbjct: 365 FLIGGITGVSLGMIPFDYQVTMSYYVVAHFHNVMMFGTAFLAMAGLYYWWPKMTGRFLDE 424
Query: 322 YILKIQFFTIFIGVNITFFPQH 257
+ F+ IG +TF PQ+
Sbjct: 425 KVGLAHFWLFMIGSWLTFLPQY 446
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/80 (32%), Positives = 39/80 (48%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F++GG+TGV+LA D LH++ +V+AHFH V+ +P G +LN
Sbjct: 391 FSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAYWFPKAFGFTLNE 450
Query: 322 YILKIQFFTIFIGVNITFFP 263
K F+ G + F P
Sbjct: 451 KWGKAAFWFWISGFYVAFMP 470
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 50.8 bits (116), Expect = 2e-05
Identities = 20/36 (55%), Positives = 30/36 (83%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 398
LF V G TG+ L++ S+++++HDT+YVVAHFH +LS
Sbjct: 507 LFLVAGFTGMWLSHVSLNVSMHDTFYVVAHFHIMLS 542
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 50.4 bits (115), Expect = 2e-05
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F VGG+TGV ++D+ LHDTY+V+ HFHY+++ +P TG +
Sbjct: 357 FIVGGVTGVFFPVITLDLHLHDTYFVLGHFHYIVNAIAFGVFGALLYY-FPHLTGRWYDE 415
Query: 322 YILKIQFFTIFIGVNITF 269
+ +I + I +G T+
Sbjct: 416 RLARISWALITVGGFATY 433
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 50.0 bits (114), Expect = 3e-05
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F++GG+TGV+LA D LH++ +++AHFH + +P G LN
Sbjct: 392 FSIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGGAVFGYLAGVSFWFPKVFGFKLND 451
Query: 322 YILKIQFFTIFIGVNITFFP 263
+ K F+ IG F P
Sbjct: 452 KLGKASFWFWQIGFMFAFMP 471
>UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyche
norvegica|Rep: Cytochrome oxidase subunit I - Psyche
norvegica
Length = 63
Score = 50.0 bits (114), Expect = 3e-05
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -1
Query: 110 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 6
QRI LF N+ SSIE +QN PPA HSY+E+PIL N
Sbjct: 28 QRILLFPSNMTSSIEWFQNTPPANHSYDEMPILIN 62
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 49.6 bits (113), Expect = 4e-05
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPL-FTGLSL 329
+F++GG +GVIL+ ++D H++ +++AHFH V+ Y L + L
Sbjct: 385 IFSIGGFSGVILSIPNLDFIFHNSMFLIAHFHSVIIGGVLFGYLSGISLWYNLIYNNCEL 444
Query: 328 NSYILKIQFFTIF--IGVNITFFPQHF 254
N+ K F +F IGV +TFFP +F
Sbjct: 445 NN---KFNFNILFWLIGVILTFFPFYF 468
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 48.8 bits (111), Expect = 7e-05
Identities = 25/47 (53%), Positives = 29/47 (61%)
Frame = -1
Query: 383 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFLGLA 243
CNY GIY L+ I K L KNSIFYNI+ K IFSTTF ++
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSIS 137
>UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21;
Aphidomorpha|Rep: Cytochrome c oxidase subunit I -
Phylloxera sp. DAD-2001a
Length = 83
Score = 48.8 bits (111), Expect = 7e-05
Identities = 25/80 (31%), Positives = 37/80 (46%)
Frame = -1
Query: 251 GLAGIPRRYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINQRINLFSLNLPSS 72
GL G+PRRYSDYP+ +++ +F LNL +S
Sbjct: 1 GLNGMPRRYSDYPNNYLTWNIMSSIGSMISTFSIIILIYWLWNSLFLKKMTIFKLNLNNS 60
Query: 71 IE*YQNLPPAEHSYNELPIL 12
I N+PP H+Y+ELP++
Sbjct: 61 IGWIHNMPPIGHTYSELPLI 80
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 48.4 bits (110), Expect = 9e-05
Identities = 25/81 (30%), Positives = 40/81 (49%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LF +GG+TG++LAN +D +H+T ++VAHFH ++ +P G L+
Sbjct: 410 LFVIGGITGIMLANPILDYQVHNTVFLVAHFHNMVVPGVLFGMLAGYTFWFPKAFGFRLD 469
Query: 325 SYILKIQFFTIFIGVNITFFP 263
+I + G FFP
Sbjct: 470 ERWGRISAYCWIFGWMGAFFP 490
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 48.0 bits (109), Expect = 1e-04
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = -2
Query: 493 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSY-I 317
GG G+I + +D T+H+T ++ HFH + + + +P TG +L +
Sbjct: 341 GGAGGLINMSYQLDTTIHNTQWITGHFHLIFAGAIVTMYFAIAYDLWPHLTGRALTHVRL 400
Query: 316 LKIQFFTIFIGVNITFFPQHF 254
++ Q + FIG+ +T FP H+
Sbjct: 401 MRWQLWLWFIGMIVTTFPWHW 421
>UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79;
Pterygota|Rep: Cytochrome oxidase subunit I -
Biopyrellia bipuncta
Length = 68
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = -1
Query: 113 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 6
+QR +F + L SS+E QN PPAEHSYNELP+L N
Sbjct: 32 SQRQVIFPVQLNSSMEWLQNTPPAEHSYNELPLLVN 67
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 46.4 bits (105), Expect = 4e-04
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYY 428
LFT+GGLTGVILAN+S+D+ LHD Y
Sbjct: 346 LFTIGGLTGVILANASLDVALHDLKY 371
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 45.6 bits (103), Expect = 7e-04
Identities = 32/84 (38%), Positives = 37/84 (44%)
Frame = -1
Query: 506 FIHSRRINRCNFSQFFXXXXXXXYXXXXXXXXXXXXXXXXICNYWGIY*LISFIYRPFIK 327
FI+ N +FSQF Y ICNY IY L+ + F K
Sbjct: 50 FIYRWSFNSGSFSQFLNWYYSTWYLLCCSSFPLRSFNSSSICNYISIYPLMPPLNWTFYK 109
Query: 326 FLYTKNSIFYNIYWSKYNIFSTTF 255
KNSI+ NIY SK NIFS TF
Sbjct: 110 SKMIKNSIYNNIYSSKSNIFSPTF 133
>UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39;
Aphidoidea|Rep: Cytochrome oxidase subunit I - Pemphigus
microsetosus
Length = 68
Score = 45.2 bits (102), Expect = 9e-04
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = -1
Query: 110 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 6
+++ +F LNL +SIE NLPP EHSY+ELP++ N
Sbjct: 33 KKMVMFKLNLNNSIEWIHNLPPLEHSYSELPLVTN 67
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/79 (30%), Positives = 42/79 (53%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
L VGGLTG++LA +I+ T+H++ +VVAHFH ++ +P G L+
Sbjct: 409 LLLVGGLTGMMLAIPAINYTVHNSVFVVAHFHCMMLLIAYAIFGAIIF-WFPKLFGFHLD 467
Query: 325 SYILKIQFFTIFIGVNITF 269
+ + F++ +G + F
Sbjct: 468 APSARANFWSFSVGTVLVF 486
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 43.2 bits (97), Expect = 0.003
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHD 437
LFTVGGLTGV+LAN+S+D+ HD
Sbjct: 347 LFTVGGLTGVVLANASLDVAFHD 369
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 43.2 bits (97), Expect = 0.003
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 401
+F +GG+TGV ID L+ TY+VV HFHY++
Sbjct: 345 MFLLGGITGVFFPLVPIDYALNGTYFVVGHFHYMV 379
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.011
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 410
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4;
Talitridae|Rep: Cytochrome oxidase subunit I - Talitrus
saltator
Length = 59
Score = 41.1 bits (92), Expect = 0.014
Identities = 14/36 (38%), Positives = 28/36 (77%)
Frame = -1
Query: 113 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 6
++R+ +F +++P+S+E + PPA+HSY++ P+L N
Sbjct: 23 SKRVYMFHMHMPTSLEWHHPSPPADHSYDDTPLLTN 58
>UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14;
Neoptera|Rep: Cytochrome oxidase subunit I - Kalotermes
flavicollis
Length = 57
Score = 40.7 bits (91), Expect = 0.019
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -1
Query: 113 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 12
N++I LF +SIE QNLPPAEHSY+ELP +
Sbjct: 21 NRQI-LFPTQTSNSIEWIQNLPPAEHSYSELPTI 53
>UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5;
Eumalacostraca|Rep: Cytochrome oxidase subunit I -
Paguristes turgidus
Length = 68
Score = 40.3 bits (90), Expect = 0.024
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -1
Query: 98 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 6
+FSL+L SSIE + PPA+HSY E+P++ N
Sbjct: 37 MFSLSLASSIEWEHSYPPADHSYMEIPMISN 67
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 39.1 bits (87), Expect = 0.057
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1
Query: 269 FSTTFLGLAGIPRRYSDYPD 210
F FLGLAG+PRRYSDYPD
Sbjct: 415 FPQHFLGLAGMPRRYSDYPD 434
Score = 37.5 bits (83), Expect = 0.17
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -2
Query: 313 KIQFFTIFIGVNITFFPQHF 254
KI F +F+GVN+TFFPQHF
Sbjct: 400 KIHFGVMFVGVNLTFFPQHF 419
>UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Partamona helleri
Length = 88
Score = 38.7 bits (86), Expect = 0.075
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = -1
Query: 239 IPRRYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINQRINLFSLNLPSSIE*Y 60
+PRRYSDYPD +++R+ LF + SS+E
Sbjct: 2 MPRRYSDYPDSYYCWNFISSMGSMISMNSLLFLIFTIFESFMSKRLILFKFH-QSSLEWL 60
Query: 59 QNLPPAEHSYNELPIL 12
N PP H NE+P+L
Sbjct: 61 NNYPPFNHMCNEIPLL 76
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 38.7 bits (86), Expect = 0.075
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 401
F +GG+ + L + I+ +H+TYYVV HFHY++
Sbjct: 114 FIIGGVQALPLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 38.3 bits (85), Expect = 0.099
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
LF GG G+I A+ +I++ +H+T ++ HFH + P TG L
Sbjct: 361 LFAFGGAGGLINASYNINLVVHNTSWISGHFHLTVGTAVTLSFMGITYWLVPHLTGRRLW 420
Query: 325 SYILK-IQFFTIFIGVNI 275
S + +Q +T F+G+ I
Sbjct: 421 SPTMALVQAWTWFVGMGI 438
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 38.3 bits (85), Expect = 0.099
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 410
LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 342 LFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 37.9 bits (84), Expect = 0.13
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 326
+ +GG G++ A+ +++ +H+T +V HFH + + +P G L
Sbjct: 339 MLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIFAGTVITMYLAVAYKLWPELCGRRLY 398
Query: 325 SYILK-IQFFTIFIGVNITFFPQH 257
S L +Q + FIG+ I P H
Sbjct: 399 SVDLALVQLWGWFIGMVIMTTPWH 422
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 36.3 bits (80), Expect = 0.40
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 478 VILANSSIDITLHDTYYVVAHFHYV 404
+ L+ D T HDTYYVVAH HY+
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL 53
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 36.3 bits (80), Expect = 0.40
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 410
LF + G +GV+ A+ +++ +H+T +VV HFH
Sbjct: 342 LFGIAGFSGVVNASFNVNYNVHNTAWVVGHFH 373
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 36.3 bits (80), Expect = 0.40
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -2
Query: 496 VGGLTGVILANSSIDITLHDTYYVVAHFH 410
+GG+TGV++ +++T H+T+ V HFH
Sbjct: 371 MGGITGVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 35.9 bits (79), Expect = 0.53
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 401
F + G ++L +SI+ H++YYVV HFH ++
Sbjct: 344 FILAGAQALVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 35.5 bits (78), Expect = 0.70
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 496 VGGLTGVILANSSIDITLHDTYYVVAHFH 410
+GG++GV + I+I +H+T YV HFH
Sbjct: 359 LGGISGVTMGVEQINIMIHNTIYVPGHFH 387
>UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI
protein - Balanus crenatus
Length = 58
Score = 35.5 bits (78), Expect = 0.70
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -1
Query: 113 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELP 18
+QR +FS NL S++E PP HSY+ELP
Sbjct: 22 SQRPTIFSPNLSSNLEWVHTTPPHYHSYDELP 53
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 34.7 bits (76), Expect = 1.2
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 323
F GG+ G+I A+ ++ +H+T +VV HFH + P TG +
Sbjct: 356 FIPGGIGGIINASFQLNEVVHNTLWVVGHFHITVGAPVAMTFYGLTFWLVPYLTGRPFSR 415
Query: 322 YILK---IQFFTIFIGVNITFFPQH 257
K IQ T +G+ + QH
Sbjct: 416 LAKKLALIQVITWSLGMFLMSTAQH 440
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 34.7 bits (76), Expect = 1.2
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 410
+F GG +G++ A +I+ +H+T +V HFH
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFH 389
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 33.9 bits (74), Expect = 2.1
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 410
F GG+TG+I A+ +++ +H+T +V HFH
Sbjct: 359 FVFGGITGLINASFTMNQVVHNTTWVPGHFH 389
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 33.1 bits (72), Expect = 3.7
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -2
Query: 505 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 410
+F +G++ A +I+ +H+T++VV HFH
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFH 381
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 32.7 bits (71), Expect = 4.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 490 GLTGVILANSSIDITLHDTYYVVAHFHYVL 401
G+TG+ A S D +H+T +VV HFH ++
Sbjct: 359 GVTGISNATISFDAIVHNTDWVVGHFHAMI 388
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 32.7 bits (71), Expect = 4.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 502 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 410
F GG G++ A+ ++D +H+T +V HFH
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFH 51
>UniRef50_Q31DK3 Cluster: Putative uncharacterized protein; n=1;
Thiomicrospira crunogena XCL-2|Rep: Putative
uncharacterized protein - Thiomicrospira crunogena
(strain XCL-2)
Length = 181
Score = 32.3 bits (70), Expect = 6.5
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -1
Query: 353 SFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFLGLAGIPRRYSDYP 213
S+++R FIK L ++Y +YW N TT + + P+ ++P
Sbjct: 12 SWVFRLFIKSLVIVIPVYYLMYWIFINQLPTTLITVNSAPKLILEHP 58
>UniRef50_Q98PT0 Cluster: MALTODEXTRIN ABC TRANSPORTER PERMEASE
PROTEIN MALC; n=1; Mycoplasma pulmonis|Rep: MALTODEXTRIN
ABC TRANSPORTER PERMEASE PROTEIN MALC - Mycoplasma
pulmonis
Length = 1034
Score = 31.9 bits (69), Expect = 8.6
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 190 IFHEIYESG*SEYRRGIPAKPKNVVEKMLYLLQ*IL*KI-EFLVYKNLMKGL 342
+ H+IY+S E ++ IP + K K +L+ IL + E L++K KG+
Sbjct: 570 LLHKIYQSKILEAQKSIPTENKKYASKKGFLINLILPGLAEILIFKQYWKGI 621
>UniRef50_A5FDI9 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium johnsoniae UW101|Rep: Putative
uncharacterized protein - Flavobacterium johnsoniae
UW101
Length = 159
Score = 31.9 bits (69), Expect = 8.6
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -2
Query: 466 NSSIDITLHDTYYVVAHFHYVL 401
+++ DI +HDTY+V+ HF+ L
Sbjct: 36 DNTFDINVHDTYFVIGHFYVAL 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 340,601,440
Number of Sequences: 1657284
Number of extensions: 5224833
Number of successful extensions: 13666
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 13151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13608
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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