Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1083
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    26   0.29 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   2.7  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   3.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   3.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   3.6  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   4.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   6.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.3  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 273 PRTRPGIPFTINKMNTYNFRKNNYSPLLMPYPTSKESE 386
           P T    PF    ++ YNFR   +  L  P  TS   E
Sbjct: 256 PSTEVSAPFFRQPLDLYNFRVPQHQVLQSPSSTSSSPE 293


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 267 SIPRTRPGIPFTINKMNTYNF 329
           S+  TRP +P+  N +N+Y F
Sbjct: 28  SLSDTRPMLPYPQNYINSYLF 48


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
 Frame = +2

Query: 452 FIDVPGLRSLTIDYIFPCNKPSRTSVTIT-VTLSLPFRLRKNVSGGSNVKSLEANLGTFP 628
           FID  G     +D+ +PC +       +  VTL    +   N  G     ++   + +  
Sbjct: 130 FIDQYGFDGFDLDWEYPCQRGGVDEDKVNFVTLLGELKSALNAKGMILSAAVSGGIASCK 189

Query: 629 IPQSILLYAENV 664
           +   I   AEN+
Sbjct: 190 LSYDIAKVAENL 201


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 293 YTWPRPRNRYYY 258
           Y +P P+ +YYY
Sbjct: 350 YNYPNPQQQYYY 361


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 293 YTWPRPRNRYYY 258
           Y +P P+ +YYY
Sbjct: 298 YNYPNPQQQYYY 309


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
 Frame = +2

Query: 452 FIDVPGLRSLTIDYIFPCNKPSRTSVTIT-VTLSLPFRLRKNVSGGSNVKSLEANLGTFP 628
           FID  G     +D+ +PC +       +  VTL    +   N  G     ++   + +  
Sbjct: 130 FIDQYGFDGFDLDWEYPCQRGGVDEDKVNFVTLLGELKSALNAKGLILSAAVSGGIASCK 189

Query: 629 IPQSILLYAENV 664
           +   I   AEN+
Sbjct: 190 LSYDIAKVAENL 201


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +2

Query: 494 IFPCNKPSRTSVTITVTLSLPFRLRKNVSGGSNVKSLE 607
           +F  N      + + V  S+PF     + G  N+K L+
Sbjct: 192 MFHVNMSHNKLINLVVAPSVPFEQDTGLGGLQNIKVLD 229


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 611 NLGTF-PIPQSILLYAENVIRYRKSPNETFVH*FRYFEKYEDFSTFRP 751
           N GT   I  +I+ +   +I++  + N T ++    F K   +ST RP
Sbjct: 328 NRGTILGILDAIVTFLIVMIQFEMTQNSTNINFVSTFFKIPFYSTLRP 375


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,109
Number of Sequences: 336
Number of extensions: 4549
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)