Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1083
(775 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060728-1|AAL28276.1| 452|Drosophila melanogaster GH17451p pro... 37 0.035
AE014297-1606|AAF54885.2| 452|Drosophila melanogaster CG8063-PA... 37 0.035
AE014296-437|AAF47631.1| 393|Drosophila melanogaster CG5717-PA ... 36 0.047
BT003613-1|AAO39616.1| 447|Drosophila melanogaster GH16592p pro... 33 0.33
AE014297-1605|AAF54884.1| 429|Drosophila melanogaster CG18550-P... 33 0.33
AY121706-1|AAM52033.1| 412|Drosophila melanogaster RH49821p pro... 31 1.8
AE013599-3590|AAF46993.1| 412|Drosophila melanogaster CG9891-PA... 31 1.8
X04427-1|CAA28024.1| 541|Drosophila melanogaster yellow gene pr... 31 2.3
AL023873-2|CAA19640.1| 541|Drosophila melanogaster EG:125H10.2,... 31 2.3
AE014298-26|AAF45497.1| 541|Drosophila melanogaster CG3757-PA p... 31 2.3
AY118575-1|AAM49944.1| 453|Drosophila melanogaster LD43175p pro... 29 7.1
AY113601-1|AAM29606.1| 438|Drosophila melanogaster RH54244p pro... 29 7.1
AF237613-1|AAF60328.1| 453|Drosophila melanogaster YELLOW-B pro... 29 7.1
AE014134-2765|AAF53564.1| 453|Drosophila melanogaster CG17914-P... 29 7.1
AE014134-2553|AAF53432.3| 438|Drosophila melanogaster CG4182-PA... 29 7.1
AE014297-1687|AAF54947.1| 426|Drosophila melanogaster CG17044-P... 29 9.4
>AY060728-1|AAL28276.1| 452|Drosophila melanogaster GH17451p
protein.
Length = 452
Score = 36.7 bits (81), Expect = 0.035
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Frame = +3
Query: 258 VIVSIPRTRPGIPFTINKMNTYNFRKNNYSPLLMPYPT------SKESENIISVYKTVEE 419
+ V++PR R GIP T+N ++ +N SP L YP + +EN++SVY+T +
Sbjct: 113 LFVTMPRRRVGIPSTLNYIDLAE-DGSNRSPKLRAYPNFALNQFNASAENLVSVYRTSVD 171
Query: 420 A 422
A
Sbjct: 172 A 172
Score = 29.9 bits (64), Expect = 4.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 422 CERYWFVDTGFIDVPGLR 475
C+R WF+DTG ++ P R
Sbjct: 173 CQRLWFIDTGMLEYPNNR 190
>AE014297-1606|AAF54885.2| 452|Drosophila melanogaster CG8063-PA
protein.
Length = 452
Score = 36.7 bits (81), Expect = 0.035
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Frame = +3
Query: 258 VIVSIPRTRPGIPFTINKMNTYNFRKNNYSPLLMPYPT------SKESENIISVYKTVEE 419
+ V++PR R GIP T+N ++ +N SP L YP + +EN++SVY+T +
Sbjct: 113 LFVTMPRRRVGIPSTLNYIDLAE-DGSNRSPKLRAYPNFALNQFNASAENLVSVYRTSVD 171
Query: 420 A 422
A
Sbjct: 172 A 172
Score = 29.9 bits (64), Expect = 4.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 422 CERYWFVDTGFIDVPGLR 475
C+R WF+DTG ++ P R
Sbjct: 173 CQRLWFIDTGMLEYPNNR 190
>AE014296-437|AAF47631.1| 393|Drosophila melanogaster CG5717-PA
protein.
Length = 393
Score = 36.3 bits (80), Expect = 0.047
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 240 RLQL*SVIVSIPRTRPGIPFTINKMNTYNFRKNNYSPLLMPYP--TSKESENIISVYKTV 413
+LQ S V++PR + G+PFT+ K+ N +K + PYP +E N ++ V
Sbjct: 84 QLQRDSAFVALPRYKQGVPFTLGKV---NLKKGECLTKIAPYPCWAIQEEGNCQALQSVV 140
Query: 414 EEAVKGTG 437
+ AV G
Sbjct: 141 DIAVDQNG 148
>BT003613-1|AAO39616.1| 447|Drosophila melanogaster GH16592p
protein.
Length = 447
Score = 33.5 bits (73), Expect = 0.33
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Frame = +3
Query: 258 VIVSIPRTRPGIPFTINKMNTYNFRKNNYSPLLMPYPT------SKESENIISVYKT 410
+ V++PR +PGIP T+N ++ + SP L YP + +N++SVY+T
Sbjct: 108 LFVTVPRRQPGIPSTLNYIDLAKDGWSQ-SPHLRAYPNLAVNQYNASEQNLVSVYRT 163
Score = 28.7 bits (61), Expect = 9.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 422 CERYWFVDTGFIDVPGLR 475
C R WFVDTG ++ P R
Sbjct: 168 CGRLWFVDTGMLEFPNNR 185
>AE014297-1605|AAF54884.1| 429|Drosophila melanogaster CG18550-PA
protein.
Length = 429
Score = 33.5 bits (73), Expect = 0.33
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Frame = +3
Query: 258 VIVSIPRTRPGIPFTINKMNTYNFRKNNYSPLLMPYPT------SKESENIISVYKT 410
+ V++PR +PGIP T+N ++ + SP L YP + +N++SVY+T
Sbjct: 90 LFVTVPRRQPGIPSTLNYIDLAKDGWSQ-SPHLRAYPNLAVNQYNASEQNLVSVYRT 145
Score = 28.7 bits (61), Expect = 9.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 422 CERYWFVDTGFIDVPGLR 475
C R WFVDTG ++ P R
Sbjct: 150 CGRLWFVDTGMLEFPNNR 167
>AY121706-1|AAM52033.1| 412|Drosophila melanogaster RH49821p
protein.
Length = 412
Score = 31.1 bits (67), Expect = 1.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 514 FAYISDDNGDAVIAFSFEEKRFWRIERQIT 603
F Y++D GD ++ + ++ WRIE + T
Sbjct: 197 FVYMADSIGDGIVVYDVAAQQSWRIENKFT 226
>AE013599-3590|AAF46993.1| 412|Drosophila melanogaster CG9891-PA
protein.
Length = 412
Score = 31.1 bits (67), Expect = 1.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 514 FAYISDDNGDAVIAFSFEEKRFWRIERQIT 603
F Y++D GD ++ + ++ WRIE + T
Sbjct: 197 FVYMADSIGDGIVVYDVAAQQSWRIENKFT 226
>X04427-1|CAA28024.1| 541|Drosophila melanogaster yellow gene
protein.
Length = 541
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 258 VIVSIPRTRPGIPFTINKMNTYNFRKNNYSPLLMPYP 368
+ V++PR R GIP T+ +N R SP L+PYP
Sbjct: 70 LFVTVPRWRDGIPATLTYINM--DRSLTGSPELIPYP 104
>AL023873-2|CAA19640.1| 541|Drosophila melanogaster
EG:125H10.2,FBgn0004034;y protein.
Length = 541
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 258 VIVSIPRTRPGIPFTINKMNTYNFRKNNYSPLLMPYP 368
+ V++PR R GIP T+ +N R SP L+PYP
Sbjct: 70 LFVTVPRWRDGIPATLTYINM--DRSLTGSPELIPYP 104
>AE014298-26|AAF45497.1| 541|Drosophila melanogaster CG3757-PA
protein.
Length = 541
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 258 VIVSIPRTRPGIPFTINKMNTYNFRKNNYSPLLMPYP 368
+ V++PR R GIP T+ +N R SP L+PYP
Sbjct: 70 LFVTVPRWRDGIPATLTYINM--DRSLTGSPELIPYP 104
>AY118575-1|AAM49944.1| 453|Drosophila melanogaster LD43175p
protein.
Length = 453
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 511 TFAYISDDNGDAVIAFSFEEKRFWRIERQITGSE--LGDFPYTAIHF 645
TFAY +D ++ +S++++ WR++ + G+F I F
Sbjct: 191 TFAYAADLGSPGLVVYSWKDEESWRVQHHFFHPDPMAGNFSINGIEF 237
>AY113601-1|AAM29606.1| 438|Drosophila melanogaster RH54244p
protein.
Length = 438
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 258 VIVSIPRTRPGIPFTINKMNTYNFRKNNYSPLLMPYPTSKESENIISVYKTVEEAVKG 431
+ V++PR + G+ T+N ++ + K SP L PYP+ + ++ I V ++ G
Sbjct: 72 IFVTVPRWKAGVAATLNYIDINSTEK---SPKLHPYPSWEANKLPIDVQPQDQKTPSG 126
>AF237613-1|AAF60328.1| 453|Drosophila melanogaster YELLOW-B
protein.
Length = 453
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 511 TFAYISDDNGDAVIAFSFEEKRFWRIERQITGSE--LGDFPYTAIHF 645
TFAY +D ++ +S++++ WR++ + G+F I F
Sbjct: 191 TFAYAADLGSPGLVVYSWKDEESWRVQHHFFHPDPMAGNFSINGIEF 237
>AE014134-2765|AAF53564.1| 453|Drosophila melanogaster CG17914-PA
protein.
Length = 453
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 511 TFAYISDDNGDAVIAFSFEEKRFWRIERQITGSE--LGDFPYTAIHF 645
TFAY +D ++ +S++++ WR++ + G+F I F
Sbjct: 191 TFAYAADLGSPGLVVYSWKDEESWRVQHHFFHPDPMAGNFSINGIEF 237
>AE014134-2553|AAF53432.3| 438|Drosophila melanogaster CG4182-PA
protein.
Length = 438
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 258 VIVSIPRTRPGIPFTINKMNTYNFRKNNYSPLLMPYPTSKESENIISVYKTVEEAVKG 431
+ V++PR + G+ T+N ++ + K SP L PYP+ + ++ I V ++ G
Sbjct: 72 IFVTVPRWKAGVAATLNYIDINSTEK---SPKLHPYPSWEANKLPIDVQPQDQKTPSG 126
>AE014297-1687|AAF54947.1| 426|Drosophila melanogaster CG17044-PA
protein.
Length = 426
Score = 28.7 bits (61), Expect = 9.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 514 FAYISDDNGDAVIAFSFEEKRFWRIERQIT 603
FAY++D A++ + + WRIE + T
Sbjct: 211 FAYLADPTSKAIVVYDVVGQSSWRIENKFT 240
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,202,316
Number of Sequences: 53049
Number of extensions: 744075
Number of successful extensions: 2055
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2053
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -