Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1080
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical... 95 7e-20
AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical ... 95 7e-20
Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1 prot... 91 8e-19
X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein. 91 8e-19
AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical... 91 8e-19
Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2 prot... 85 6e-17
Y14065-1|CAA74392.1| 173|Caenorhabditis elegans catalase 2 prot... 85 6e-17
U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catal... 84 1e-16
AF022980-14|AAG24190.1| 332|Caenorhabditis elegans Serpentine r... 32 0.55
AF022980-11|AAG24189.1| 330|Caenorhabditis elegans Serpentine r... 30 1.7
AF000198-9|AAB53057.4| 684|Caenorhabditis elegans Hypothetical ... 30 1.7
AF022980-4|AAG24191.1| 335|Caenorhabditis elegans Serpentine re... 29 3.9
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 29 5.1
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 29 5.1
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 29 5.1
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 29 5.1
AF047657-1|AAK18951.1| 328|Caenorhabditis elegans Serpentine re... 28 6.7
AC006767-1|AAF60573.2| 332|Caenorhabditis elegans Serpentine re... 28 8.9
>AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical
protein Y54G11A.13 protein.
Length = 512
Score = 94.7 bits (225), Expect = 7e-20
Identities = 44/103 (42%), Positives = 62/103 (60%)
Frame = -1
Query: 798 DTHRHRLGANYLKIPVNCPYKVAVSTYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQR 619
DTH HRLG NY+++PVNCPY+ T QRDG A +Q D PNYFPNSF G + R
Sbjct: 371 DTHYHRLGPNYIQLPVNCPYRSRAHTTQRDGAMAYESQGDAPNYFPNSFRGYR--TRDDV 428
Query: 618 LQPRYNVGGDVDRYDSGQTEDNFSQATALYKQVFDDALNNELL 490
+ + GDVDRY++G + N+ Q +++V + + L+
Sbjct: 429 KESTFQTTGDVDRYETGD-DHNYEQPRQFWEKVLKEEERDRLV 470
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3
Query: 505 KQRAIANIVDHLKDAAAFIQERAIKIFSQVHPELGNKVAAGLAPYK 368
+ R + N+ L IQ +K F++VHP+ GN + L K
Sbjct: 466 RDRLVGNLASDLGGCLEEIQNGMVKEFTKVHPDFGNALRHQLCQKK 511
>AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical
protein Y54G11A.6 protein.
Length = 497
Score = 94.7 bits (225), Expect = 7e-20
Identities = 44/103 (42%), Positives = 62/103 (60%)
Frame = -1
Query: 798 DTHRHRLGANYLKIPVNCPYKVAVSTYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQR 619
DTH HRLG NY+++PVNCPY+ T QRDG A +Q D PNYFPNSF G + R
Sbjct: 356 DTHYHRLGPNYIQLPVNCPYRSRAHTTQRDGAMAYESQGDAPNYFPNSFRGYR--TRDDV 413
Query: 618 LQPRYNVGGDVDRYDSGQTEDNFSQATALYKQVFDDALNNELL 490
+ + GDVDRY++G + N+ Q +++V + + L+
Sbjct: 414 KESTFQTTGDVDRYETGD-DHNYEQPRQFWEKVLKEEERDRLV 455
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3
Query: 505 KQRAIANIVDHLKDAAAFIQERAIKIFSQVHPELGNKVAAGLAPYK 368
+ R + N+ L IQ +K F++VHP+ GN + L K
Sbjct: 451 RDRLVGNLASDLGGCLEEIQNGMVKEFTKVHPDFGNALRHQLCQKK 496
>Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1
protein.
Length = 497
Score = 91.1 bits (216), Expect = 8e-19
Identities = 42/95 (44%), Positives = 58/95 (61%)
Frame = -1
Query: 798 DTHRHRLGANYLKIPVNCPYKVAVSTYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQR 619
DTH HRLG NY+++PVNCPY+ QRDG A NQ PN+FPNSF+ + P +
Sbjct: 353 DTHFHRLGPNYIQLPVNCPYRSRAHNTQRDGAMAYDNQQHAPNFFPNSFNYGKTRPDVK- 411
Query: 618 LQPRYNVGGDVDRYDSGQTEDNFSQATALYKQVFD 514
+ GDVDRY+SG ++N+ Q +++V D
Sbjct: 412 -DTTFPATGDVDRYESGD-DNNYDQPRQFWEKVLD 444
>X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein.
Length = 500
Score = 91.1 bits (216), Expect = 8e-19
Identities = 42/95 (44%), Positives = 58/95 (61%)
Frame = -1
Query: 798 DTHRHRLGANYLKIPVNCPYKVAVSTYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQR 619
DTH HRLG NY+++PVNCPY+ QRDG A NQ PN+FPNSF+ + P +
Sbjct: 356 DTHFHRLGPNYIQLPVNCPYRSRAHNTQRDGAMAYDNQQHAPNFFPNSFNYGKTRPDVK- 414
Query: 618 LQPRYNVGGDVDRYDSGQTEDNFSQATALYKQVFD 514
+ GDVDRY+SG ++N+ Q +++V D
Sbjct: 415 -DTTFPATGDVDRYESGD-DNNYDQPRQFWEKVLD 447
>AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical
protein Y54G11A.5 protein.
Length = 500
Score = 91.1 bits (216), Expect = 8e-19
Identities = 42/95 (44%), Positives = 58/95 (61%)
Frame = -1
Query: 798 DTHRHRLGANYLKIPVNCPYKVAVSTYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQR 619
DTH HRLG NY+++PVNCPY+ QRDG A NQ PN+FPNSF+ + P +
Sbjct: 356 DTHFHRLGPNYIQLPVNCPYRSRAHNTQRDGAMAYDNQQHAPNFFPNSFNYGKTRPDVK- 414
Query: 618 LQPRYNVGGDVDRYDSGQTEDNFSQATALYKQVFD 514
+ GDVDRY+SG ++N+ Q +++V D
Sbjct: 415 -DTTFPATGDVDRYESGD-DNNYDQPRQFWEKVLD 447
>Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2
protein.
Length = 497
Score = 85.0 bits (201), Expect = 6e-17
Identities = 40/103 (38%), Positives = 61/103 (59%)
Frame = -1
Query: 798 DTHRHRLGANYLKIPVNCPYKVAVSTYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQR 619
DTH HRLG NY+++PVNCPY+ T QR+ A +Q++ PN FPNSF G + R
Sbjct: 356 DTHYHRLGPNYIQLPVNCPYRSRAHTTQREVAMAYESQENAPNSFPNSFRGYR--TRDDV 413
Query: 618 LQPRYNVGGDVDRYDSGQTEDNFSQATALYKQVFDDALNNELL 490
+ + GDVDRY++G + N+ Q +++V + + L+
Sbjct: 414 KESTFQTTGDVDRYETGD-DHNYEQPRQFWEKVLKEEERDRLV 455
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3
Query: 505 KQRAIANIVDHLKDAAAFIQERAIKIFSQVHPELGNKVAAGLAPYK 368
+ R + N+ L IQ +K F++VHP+ GN + L K
Sbjct: 451 RDRLVGNLASDLGGCLEEIQNGMVKEFTKVHPDFGNALRHQLCQKK 496
>Y14065-1|CAA74392.1| 173|Caenorhabditis elegans catalase 2
protein.
Length = 173
Score = 85.0 bits (201), Expect = 6e-17
Identities = 40/103 (38%), Positives = 61/103 (59%)
Frame = -1
Query: 798 DTHRHRLGANYLKIPVNCPYKVAVSTYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQR 619
DTH HRLG NY+++PVNCPY+ T QR+ A +Q++ PN FPNSF G + R
Sbjct: 32 DTHYHRLGPNYIQLPVNCPYRSRAHTTQREVAMAYESQENAPNSFPNSFRGYR--TRDDV 89
Query: 618 LQPRYNVGGDVDRYDSGQTEDNFSQATALYKQVFDDALNNELL 490
+ + GDVDRY++G + N+ Q +++V + + L+
Sbjct: 90 KESTFQTTGDVDRYETGD-DHNYEQPRQFWEKVLKEEERDRLV 131
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3
Query: 505 KQRAIANIVDHLKDAAAFIQERAIKIFSQVHPELGNKVAAGLAPYK 368
+ R + N+ L IQ +K F++VHP+ GN + L K
Sbjct: 127 RDRLVGNLASDLGGCLEEIQNGMVKEFTKVHPDFGNALRHQLCQKK 172
>U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catalase
protein.
Length = 496
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/103 (39%), Positives = 58/103 (56%)
Frame = -1
Query: 798 DTHRHRLGANYLKIPVNCPYKVAVSTYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQR 619
DTH HRLG NY+++PVNCPY+ T QRDG A +Q D PNYFPNSF G + R
Sbjct: 355 DTHYHRLGPNYIQLPVNCPYRSRAHTTQRDGAMAYESQGDAPNYFPNSFRGYR--TRDDV 412
Query: 618 LQPRYNVGGDVDRYDSGQTEDNFSQATALYKQVFDDALNNELL 490
+ + GDV +G + N+ Q +++V + + L+
Sbjct: 413 KESTFQTTGDVGSLWTGD-DHNYEQPRQFWEKVLKEEERDRLV 454
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3
Query: 505 KQRAIANIVDHLKDAAAFIQERAIKIFSQVHPELGNKVAAGLAPYK 368
+ R + N+ L IQ +K F++VHP+ GN + L K
Sbjct: 450 RDRLVGNLASDLGGCLEEIQNGMVKEFTKVHPDFGNALRHQLCQKK 495
>AF022980-14|AAG24190.1| 332|Caenorhabditis elegans Serpentine
receptor, class j protein57 protein.
Length = 332
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 144 SKFQLSILRVFSVQKKLPIFIDYS 215
SKFQL +LR VQ +PIFI +S
Sbjct: 237 SKFQLELLRALIVQTVIPIFISFS 260
>AF022980-11|AAG24189.1| 330|Caenorhabditis elegans Serpentine
receptor, class j protein49 protein.
Length = 330
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 108 KTQNLHPLN-LHRSKFQLSILRVFSVQKKLPIFIDYS 215
K +NL + + SKFQ +LR VQ +PIFI +S
Sbjct: 224 KLENLSVTSSVKTSKFQFELLRALIVQTVVPIFISFS 260
>AF000198-9|AAB53057.4| 684|Caenorhabditis elegans Hypothetical
protein T28F2.7 protein.
Length = 684
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 386 SCYFISKFRMYLREDLDSSFLNKRSSILEVIYYIGNSSLFSA--SSKTCLYSAVAWEKLS 559
S F + FR Y+ + FL E I +S ++SA SSK L S+ AW S
Sbjct: 310 SSAFENGFRFYIHSSEEIPFLAS-----EGIAVSPDSVVYSALSSSKYILLSSNAWGNCS 364
Query: 560 SVWPLSYRSTSPPT 601
WP Y + P T
Sbjct: 365 DSWPRGYDYSFPYT 378
>AF022980-4|AAG24191.1| 335|Caenorhabditis elegans Serpentine
receptor, class j protein50 protein.
Length = 335
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 90 TIFFCFKTQNLHPLNLHRSKFQLSILRVFSVQKKLPIFIDYS 215
T+ C + ++ SKFQ +LR VQ +PI I YS
Sbjct: 219 TLIMCKLKKTAMHVSQATSKFQFELLRALIVQTIVPICISYS 260
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -1
Query: 726 STYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQRLQPRYN 601
S Y D PQ D+ Y N + P AQ+ QP YN
Sbjct: 108 SYYDFDNPQRPAQADEAATYQENGYGFVDFQPFAQQQQPAYN 149
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -1
Query: 726 STYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQRLQPRYN 601
S Y D PQ D+ Y N + P AQ+ QP YN
Sbjct: 125 SYYDFDNPQRPAQADEAATYQENGYGFVDFQPFAQQQQPAYN 166
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -1
Query: 726 STYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQRLQPRYN 601
S Y D PQ D+ Y N + P AQ+ QP YN
Sbjct: 125 SYYDFDNPQRPAQADEAATYQENGYGFVDFQPFAQQQQPAYN 166
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -1
Query: 726 STYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQRLQPRYN 601
S Y D PQ D+ Y N + P AQ+ QP YN
Sbjct: 108 SYYDFDNPQRPAQADEAATYQENGYGFVDFQPFAQQQQPAYN 149
>AF047657-1|AAK18951.1| 328|Caenorhabditis elegans Serpentine
receptor, class j protein54 protein.
Length = 328
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 144 SKFQLSILRVFSVQKKLPIFIDY 212
SKFQ +LR VQ +PIFI +
Sbjct: 237 SKFQFELLRALVVQTVVPIFISF 259
>AC006767-1|AAF60573.2| 332|Caenorhabditis elegans Serpentine
receptor, class j protein55 protein.
Length = 332
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 144 SKFQLSILRVFSVQKKLPIFIDYS 215
SKFQ +LR VQ +PI I +S
Sbjct: 237 SKFQFELLRALIVQTVIPILISFS 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,644,231
Number of Sequences: 27780
Number of extensions: 407110
Number of successful extensions: 1041
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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